Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4aE9Q735 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.14■□□□□ 0.65
Ube4aE9Q735 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.14■□□□□ 0.65
Ube4aE9Q735 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4aE9Q735 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4aE9Q735 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4aE9Q735 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4aE9Q735 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.14■□□□□ 0.65
Ube4aE9Q735 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ube4aE9Q735 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.14■□□□□ 0.65
Ube4aE9Q735 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.13■□□□□ 0.65
Ube4aE9Q735 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.13■□□□□ 0.65
Ube4aE9Q735 Gm9682-201ENSMUST00000197505 556 ntBASIC19.13■□□□□ 0.65
Ube4aE9Q735 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.13■□□□□ 0.65
Ube4aE9Q735 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.12■□□□□ 0.65
Ube4aE9Q735 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.12■□□□□ 0.65
Ube4aE9Q735 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4aE9Q735 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ube4aE9Q735 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ube4aE9Q735 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4aE9Q735 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4aE9Q735 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4aE9Q735 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4aE9Q735 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ube4aE9Q735 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4aE9Q735 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.11■□□□□ 0.65
Ube4aE9Q735 Gm14822-201ENSMUST00000122247 291 ntBASIC19.11■□□□□ 0.65
Ube4aE9Q735 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.11■□□□□ 0.65
Ube4aE9Q735 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.11■□□□□ 0.65
Ube4aE9Q735 Gm7787-201ENSMUST00000216858 688 ntBASIC19.11■□□□□ 0.65
Ube4aE9Q735 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ube4aE9Q735 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ube4aE9Q735 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.11■□□□□ 0.65
Ube4aE9Q735 Haglr-201ENSMUST00000100000 2085 ntBASIC19.11■□□□□ 0.65
Ube4aE9Q735 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4aE9Q735 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4aE9Q735 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4aE9Q735 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.11■□□□□ 0.65
Ube4aE9Q735 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4aE9Q735 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.1■□□□□ 0.65
Ube4aE9Q735 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ube4aE9Q735 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.1■□□□□ 0.65
Ube4aE9Q735 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube4aE9Q735 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ube4aE9Q735 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ube4aE9Q735 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.1■□□□□ 0.65
Ube4aE9Q735 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ube4aE9Q735 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ube4aE9Q735 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ube4aE9Q735 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube4aE9Q735 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube4aE9Q735 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4aE9Q735 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.09■□□□□ 0.65
Ube4aE9Q735 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4aE9Q735 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4aE9Q735 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4aE9Q735 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4aE9Q735 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4aE9Q735 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4aE9Q735 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ube4aE9Q735 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4aE9Q735 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms