Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb9E9Q5G2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Gm25990-201ENSMUST00000102440 86 ntBASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb9E9Q5G2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb9E9Q5G2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb9E9Q5G2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb9E9Q5G2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Pcdhb9E9Q5G2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb9E9Q5G2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb9E9Q5G2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Pcdhb9E9Q5G2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.76■□□□□ 0.59
Pcdhb9E9Q5G2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
Pcdhb9E9Q5G2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb9E9Q5G2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb9E9Q5G2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms