Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Herc1E9PZP8 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gm21854-201ENSMUST00000179901 471 ntBASIC8.89□□□□□ -0.99
Herc1E9PZP8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gm38225-201ENSMUST00000194001 393 ntBASIC8.89□□□□□ -0.99
Herc1E9PZP8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Herc1E9PZP8 Gm43006-201ENSMUST00000197702 1602 ntBASIC8.89□□□□□ -0.99
Herc1E9PZP8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC8.88□□□□□ -0.99
Herc1E9PZP8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC8.88□□□□□ -0.99
Herc1E9PZP8 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Gm18246-201ENSMUST00000221023 728 ntBASIC8.88□□□□□ -0.99
Herc1E9PZP8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Herc1E9PZP8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC8.87□□□□□ -0.99
Herc1E9PZP8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC8.87□□□□□ -0.99
Herc1E9PZP8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Gm44344-201ENSMUST00000200287 129 ntBASIC8.87□□□□□ -0.99
Herc1E9PZP8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC8.87□□□□□ -0.99
Herc1E9PZP8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Herc1E9PZP8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Herc1E9PZP8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Herc1E9PZP8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Herc1E9PZP8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Herc1E9PZP8 Gm43138-201ENSMUST00000199123 708 ntBASIC8.86□□□□□ -0.99
Herc1E9PZP8 AC155637.1-201ENSMUST00000218560 636 ntBASIC8.86□□□□□ -0.99
Herc1E9PZP8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Herc1E9PZP8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Herc1E9PZP8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms