Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm8825-201ENSMUST00000182565 998 ntBASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Gm4518-201ENSMUST00000182638 718 ntBASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Gm37935-201ENSMUST00000192012 982 ntBASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Srp54bE9PXC0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.69■□□□□ 0.1
Srp54bE9PXC0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Gm18622-201ENSMUST00000219361 595 ntBASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Srp54bE9PXC0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Gm13036-201ENSMUST00000117799 748 ntBASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Srp54bE9PXC0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.67■□□□□ 0.1
Srp54bE9PXC0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms