Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Shank1D3YZU1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shank1D3YZU1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.25□□□□□ -0.13
Shank1D3YZU1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shank1D3YZU1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Gm8825-201ENSMUST00000182565 998 ntBASIC14.24□□□□□ -0.13
Shank1D3YZU1 Gm44492-201ENSMUST00000197012 141 ntBASIC14.24□□□□□ -0.13
Shank1D3YZU1 Gm43438-201ENSMUST00000198133 379 ntBASIC14.24□□□□□ -0.13
Shank1D3YZU1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.24□□□□□ -0.13
Shank1D3YZU1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Gm23547-201ENSMUST00000158210 271 ntBASIC14.23□□□□□ -0.13
Shank1D3YZU1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms