Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Mir3081-201ENSMUST00000175305 84 ntBASIC16.93■□□□□ 0.3
Rfx8D3YU81 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx8D3YU81 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.92■□□□□ 0.3
Rfx8D3YU81 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx8D3YU81 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.91■□□□□ 0.3
Rfx8D3YU81 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rfx8D3YU81 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.91■□□□□ 0.3
Rfx8D3YU81 Gm17807-201ENSMUST00000186869 298 ntBASIC16.91■□□□□ 0.3
Rfx8D3YU81 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.91■□□□□ 0.3
Rfx8D3YU81 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.91■□□□□ 0.3
Rfx8D3YU81 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx8D3YU81 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.9■□□□□ 0.3
Rfx8D3YU81 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx8D3YU81 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfx8D3YU81 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfx8D3YU81 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfx8D3YU81 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.89■□□□□ 0.29
Rfx8D3YU81 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rfx8D3YU81 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rfx8D3YU81 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx8D3YU81 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms