Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Usp42B2RQC2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Usp42B2RQC2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Usp42B2RQC2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp42B2RQC2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.66■□□□□ 0.58
Usp42B2RQC2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp42B2RQC2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp42B2RQC2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp42B2RQC2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp42B2RQC2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp42B2RQC2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp42B2RQC2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp42B2RQC2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp42B2RQC2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.65■□□□□ 0.58
Usp42B2RQC2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Birc2-201ENSMUST00000054878 378 ntBASIC18.65■□□□□ 0.58
Usp42B2RQC2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp42B2RQC2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Usp42B2RQC2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Usp42B2RQC2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Usp42B2RQC2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.64■□□□□ 0.58
Usp42B2RQC2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp42B2RQC2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Gm4459-201ENSMUST00000118750 468 ntBASIC18.64■□□□□ 0.57
Usp42B2RQC2 Gm12497-201ENSMUST00000138778 237 ntBASIC18.64■□□□□ 0.57
Usp42B2RQC2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp42B2RQC2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Usp42B2RQC2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp42B2RQC2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp42B2RQC2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm8825-201ENSMUST00000182565 998 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm4518-201ENSMUST00000182638 718 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.63■□□□□ 0.57
Usp42B2RQC2 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.63■□□□□ 0.57
Usp42B2RQC2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp42B2RQC2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp42B2RQC2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp42B2RQC2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.62■□□□□ 0.57
Usp42B2RQC2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms