Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn7aB1AYL1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scn7aB1AYL1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.44■□□□□ 0.86
Scn7aB1AYL1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Scn7aB1AYL1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC20.44■□□□□ 0.86
Scn7aB1AYL1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn7aB1AYL1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn7aB1AYL1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn7aB1AYL1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn7aB1AYL1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn7aB1AYL1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC20.44■□□□□ 0.86
Scn7aB1AYL1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn7aB1AYL1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scn7aB1AYL1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn7aB1AYL1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn7aB1AYL1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm22065-201ENSMUST00000103753 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm22066-201ENSMUST00000103761 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm24932-201ENSMUST00000103763 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm24115-201ENSMUST00000103799 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm22190-201ENSMUST00000103827 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm22191-201ENSMUST00000103831 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm24721-201ENSMUST00000103849 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm28018-201ENSMUST00000103869 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm26399-201ENSMUST00000103937 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm13365-201ENSMUST00000121188 973 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm25349-201ENSMUST00000177728 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm23616-201ENSMUST00000177797 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm25871-201ENSMUST00000177816 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm24752-201ENSMUST00000178240 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm24496-201ENSMUST00000178287 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm25649-201ENSMUST00000178476 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm25548-201ENSMUST00000178681 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm23147-201ENSMUST00000178841 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm26095-201ENSMUST00000179270 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm22171-201ENSMUST00000179283 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm23936-201ENSMUST00000179354 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm22619-201ENSMUST00000179516 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm25255-201ENSMUST00000179579 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm24755-201ENSMUST00000179691 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm26506-201ENSMUST00000179692 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm25086-201ENSMUST00000179931 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm23243-201ENSMUST00000180047 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm24659-201ENSMUST00000180212 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm24169-201ENSMUST00000180244 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm23689-201ENSMUST00000180354 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm27359-201ENSMUST00000184153 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm27785-201ENSMUST00000184268 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm27466-201ENSMUST00000184396 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm27703-201ENSMUST00000184836 110 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 AC166341.4-201ENSMUST00000220625 123 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm13337-201ENSMUST00000119183 1594 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm9385-201ENSMUST00000117563 472 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Gm15920-201ENSMUST00000118998 402 ntBASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC20.42■□□□□ 0.86
Scn7aB1AYL1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms