Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.42□□□□□ -0.26
Col6a4A2AX52 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.42□□□□□ -0.26
Col6a4A2AX52 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col6a4A2AX52 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col6a4A2AX52 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Rarb-207ENSMUST00000225921 2756 ntBASIC13.41□□□□□ -0.26
Col6a4A2AX52 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.41□□□□□ -0.26
Col6a4A2AX52 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Gm13616-201ENSMUST00000120600 222 ntBASIC13.41□□□□□ -0.26
Col6a4A2AX52 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col6a4A2AX52 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.4□□□□□ -0.26
Col6a4A2AX52 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.4□□□□□ -0.26
Col6a4A2AX52 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.4□□□□□ -0.26
Col6a4A2AX52 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Gm17968-201ENSMUST00000194902 784 ntBASIC13.4□□□□□ -0.26
Col6a4A2AX52 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.4□□□□□ -0.26
Col6a4A2AX52 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col6a4A2AX52 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col6a4A2AX52 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col6a4A2AX52 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.39□□□□□ -0.27
Col6a4A2AX52 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms