Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Ccdc112A0AUP1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc112A0AUP1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc112A0AUP1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc112A0AUP1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc112A0AUP1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc112A0AUP1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc112A0AUP1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc112A0AUP1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.23■□□□□ 0.51
Ccdc112A0AUP1 Gm44430-201ENSMUST00000203376 995 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms