Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv17A0A140T8P8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv17A0A140T8P8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv17A0A140T8P8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms