Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lcmt1A0A0U1RNF2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Gm11950-201ENSMUST00000121615 838 ntBASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lcmt1A0A0U1RNF2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lcmt1A0A0U1RNF2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lcmt1A0A0U1RNF2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
Lcmt1A0A0U1RNF2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lcmt1A0A0U1RNF2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lcmt1A0A0U1RNF2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lcmt1A0A0U1RNF2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lcmt1A0A0U1RNF2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lcmt1A0A0U1RNF2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.74■□□□□ 0.43
Lcmt1A0A0U1RNF2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Lcmt1A0A0U1RNF2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lcmt1A0A0U1RNF2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lcmt1A0A0U1RNF2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lcmt1A0A0U1RNF2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.74■□□□□ 0.43
Lcmt1A0A0U1RNF2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lcmt1A0A0U1RNF2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms