Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-4A0A075B6B4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Gm13312-201ENSMUST00000119631 718 ntBASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-4A0A075B6B4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Gm21362-201ENSMUST00000194272 928 ntBASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-4A0A075B6B4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav6-4A0A075B6B4 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms