Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm3375-201ENSMUST00000203929 796 ntBASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.95□□□□□ -0.5
Trav6n-6A0A075B6B2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Mir6982-201ENSMUST00000184354 68 ntBASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm30025-201ENSMUST00000218555 728 ntBASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6n-6A0A075B6B2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Gm9731-201ENSMUST00000209480 747 ntBASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6n-6A0A075B6B2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms