Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Gm36967-201ENSMUST00000193814 266 ntBASIC12.72□□□□□ -0.37
Trav17A0A075B655 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.72□□□□□ -0.37
Trav17A0A075B655 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.72□□□□□ -0.37
Trav17A0A075B655 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav17A0A075B655 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav17A0A075B655 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav17A0A075B655 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav17A0A075B655 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav17A0A075B655 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav17A0A075B655 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav17A0A075B655 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav17A0A075B655 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav17A0A075B655 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav17A0A075B655 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav17A0A075B655 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav17A0A075B655 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav17A0A075B655 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav17A0A075B655 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav17A0A075B655 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trav17A0A075B655 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav17A0A075B655 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav17A0A075B655 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trav17A0A075B655 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.7□□□□□ -0.38
Trav17A0A075B655 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.7□□□□□ -0.38
Trav17A0A075B655 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.7□□□□□ -0.38
Trav17A0A075B655 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav17A0A075B655 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.7□□□□□ -0.38
Trav17A0A075B655 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms