Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8n-2A0A075B633 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8n-2A0A075B633 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Trav8n-2A0A075B633 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8n-2A0A075B633 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8n-2A0A075B633 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8n-2A0A075B633 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8n-2A0A075B633 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8n-2A0A075B633 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8n-2A0A075B633 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav8n-2A0A075B633 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.58□□□□□ -0.08
Trav8n-2A0A075B633 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Trav8n-2A0A075B633 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Trav8n-2A0A075B633 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8n-2A0A075B633 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8n-2A0A075B633 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav8n-2A0A075B633 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8n-2A0A075B633 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8n-2A0A075B633 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trav8n-2A0A075B633 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Gm15358-201ENSMUST00000119249 520 ntBASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Gm27300-201ENSMUST00000184085 97 ntBASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Gm27335-201ENSMUST00000184758 97 ntBASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8n-2A0A075B633 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Gm14701-201ENSMUST00000117156 348 ntBASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Auts2-212ENSMUST00000178555 309 ntBASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Gm4899-201ENSMUST00000178708 719 ntBASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8n-2A0A075B633 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms