Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
PHOX2BQ99453 U7.6-201ENST00000610841 64 ntBASIC1.39□□□□□ -2.19
PHOX2BQ99453 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
PHOX2BQ99453 Y_RNA.633-201ENST00000459107 95 ntBASIC1.38□□□□□ -2.19
PHOX2BQ99453 RNA5SP257-201ENST00000363023 116 ntBASIC1.37□□□□□ -2.19
PHOX2BQ99453 RNU4-37P-201ENST00000410214 84 ntBASIC1.37□□□□□ -2.19
PHOX2BQ99453 AL157398.1-201ENST00000452981 186 ntBASIC1.37□□□□□ -2.19
PHOX2BQ99453 SNORD2-201ENST00000459163 69 ntBASIC1.37□□□□□ -2.19
PHOX2BQ99453 RNA5SP330-201ENST00000517096 96 ntBASIC1.37□□□□□ -2.19
PHOX2BQ99453 RNU6-92P-201ENST00000605893 104 ntBASIC1.37□□□□□ -2.19
PHOX2BQ99453 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
PHOX2BQ99453 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
PHOX2BQ99453 MIR548C-201ENST00000384815 97 ntBASIC1.36□□□□□ -2.19
PHOX2BQ99453 MIR4473-201ENST00000583731 91 ntBASIC1.36□□□□□ -2.19
PHOX2BQ99453 RNA5SP121-201ENST00000516537 101 ntBASIC1.35□□□□□ -2.19
PHOX2BQ99453 AL590095.2-201ENST00000604136 117 ntBASIC1.35□□□□□ -2.19
PHOX2BQ99453 RNU6-35P-201ENST00000384530 107 ntBASIC1.34□□□□□ -2.19
PHOX2BQ99453 MIR517B-201ENST00000385102 67 ntBASIC1.34□□□□□ -2.19
PHOX2BQ99453 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
PHOX2BQ99453 SNORD113-2-201ENST00000391082 72 ntBASIC1.34□□□□□ -2.19
PHOX2BQ99453 MIR466-201ENST00000580653 84 ntBASIC1.34□□□□□ -2.19
PHOX2BQ99453 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PHOX2BQ99453 RNA5SP192-201ENST00000364404 120 ntBASIC1.33□□□□□ -2.2
PHOX2BQ99453 MIR140-201ENST00000385282 100 ntBASIC1.33□□□□□ -2.2
PHOX2BQ99453 AC079150.2-201ENST00000443733 78 ntBASIC1.33□□□□□ -2.2
PHOX2BQ99453 snoU13.13-201ENST00000458842 104 ntBASIC1.33□□□□□ -2.2
PHOX2BQ99453 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
PHOX2BQ99453 SNORA36.2-201ENST00000384004 127 ntBASIC1.32□□□□□ -2.2
PHOX2BQ99453 RNU6-614P-201ENST00000384369 107 ntBASIC1.32□□□□□ -2.2
PHOX2BQ99453 U6.59-201ENST00000615686 107 ntBASIC1.32□□□□□ -2.2
PHOX2BQ99453 MIR20A-201ENST00000362279 71 ntBASIC1.31□□□□□ -2.2
PHOX2BQ99453 RNU6-698P-201ENST00000363523 107 ntBASIC1.31□□□□□ -2.2
PHOX2BQ99453 RNU6-34P-201ENST00000364874 107 ntBASIC1.31□□□□□ -2.2
PHOX2BQ99453 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
PHOX2BQ99453 AC244090.1-201ENST00000441884 93 ntBASIC1.31□□□□□ -2.2
PHOX2BQ99453 MIR548AE1-201ENST00000583292 70 ntBASIC1.31□□□□□ -2.2
PHOX2BQ99453 MIR548V-201ENST00000584165 80 ntBASIC1.31□□□□□ -2.2
PHOX2BQ99453 Y_RNA.125-201ENST00000363371 111 ntBASIC1.3□□□□□ -2.2
PHOX2BQ99453 RNU6-848P-201ENST00000515948 107 ntBASIC1.3□□□□□ -2.2
PHOX2BQ99453 RNU6-617P-201ENST00000516147 107 ntBASIC1.3□□□□□ -2.2
PHOX2BQ99453 RNU6-473P-201ENST00000516164 107 ntBASIC1.3□□□□□ -2.2
PHOX2BQ99453 RNU6-1049P-201ENST00000516414 107 ntBASIC1.3□□□□□ -2.2
PHOX2BQ99453 RNU6-122P-201ENST00000516818 107 ntBASIC1.3□□□□□ -2.2
PHOX2BQ99453 MIR373-201ENST00000362273 69 ntBASIC1.29□□□□□ -2.2
PHOX2BQ99453 SNORD71-201ENST00000411292 86 ntBASIC1.29□□□□□ -2.2
PHOX2BQ99453 MIR633-201ENST00000384821 98 ntBASIC1.28□□□□□ -2.2
PHOX2BQ99453 MIR548E-201ENST00000408287 88 ntBASIC1.28□□□□□ -2.2
PHOX2BQ99453 SNORA70.25-201ENST00000612741 95 ntBASIC1.28□□□□□ -2.2
PHOX2BQ99453 RNA5SP517-201ENST00000364724 117 ntBASIC1.27□□□□□ -2.21
PHOX2BQ99453 SNORA33.1-201ENST00000364957 130 ntBASIC1.27□□□□□ -2.21
PHOX2BQ99453 RNU6-110P-201ENST00000384508 104 ntBASIC1.27□□□□□ -2.21
PHOX2BQ99453 MIR608-201ENST00000384820 100 ntBASIC1.27□□□□□ -2.21
PHOX2BQ99453 U2.7-201ENST00000619197 100 ntBASIC1.27□□□□□ -2.21
PHOX2BQ99453 MIR6086-201ENST00000638065 55 ntBASIC1.27□□□□□ -2.21
PHOX2BQ99453 SNORD114-29-201ENST00000364819 70 ntBASIC1.26□□□□□ -2.21
PHOX2BQ99453 SNORA2A-201ENST00000383885 135 ntBASIC1.26□□□□□ -2.21
PHOX2BQ99453 SNORA40.8-201ENST00000411034 126 ntBASIC1.26□□□□□ -2.21
PHOX2BQ99453 RNU7-174P-201ENST00000516248 59 ntBASIC1.25□□□□□ -2.21
PHOX2BQ99453 U6.96-201ENST00000636425 70 ntBASIC1.25□□□□□ -2.21
PHOX2BQ99453 MIR924-201ENST00000638017 53 ntBASIC1.25□□□□□ -2.21
PHOX2BQ99453 SNORD118-201ENST00000363593 134 ntBASIC1.24□□□□□ -2.21
PHOX2BQ99453 HMGN2P22-201ENST00000427588 175 ntBASIC1.24□□□□□ -2.21
PHOX2BQ99453 AC098934.3-201ENST00000430450 190 ntBASIC1.24□□□□□ -2.21
PHOX2BQ99453 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.24□□□□□ -2.21
PHOX2BQ99453 AL627230.5-201ENST00000619807 58 ntBASIC1.24□□□□□ -2.21
PHOX2BQ99453 MIR582-201ENST00000365731 98 ntBASIC1.23□□□□□ -2.21
PHOX2BQ99453 MIR630-201ENST00000384957 97 ntBASIC1.23□□□□□ -2.21
PHOX2BQ99453 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
PHOX2BQ99453 CYP3A137P-201ENST00000562436 69 ntBASIC1.23□□□□□ -2.21
PHOX2BQ99453 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
PHOX2BQ99453 MIR4752-201ENST00000579672 72 ntBASIC1.23□□□□□ -2.21
PHOX2BQ99453 MIR3938-201ENST00000582157 103 ntBASIC1.23□□□□□ -2.21
PHOX2BQ99453 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
PHOX2BQ99453 MIR4295-201ENST00000585286 85 ntBASIC1.22□□□□□ -2.21
PHOX2BQ99453 AC211469.2-201ENST00000605461 205 ntBASIC1.22□□□□□ -2.21
PHOX2BQ99453 RNU6-1079P-201ENST00000362861 110 ntBASIC1.21□□□□□ -2.22
PHOX2BQ99453 AL021921.1-201ENST00000442774 93 ntBASIC1.21□□□□□ -2.22
PHOX2BQ99453 AC069271.1-201ENST00000445577 156 ntBASIC1.21□□□□□ -2.22
PHOX2BQ99453 RNU6-229P-201ENST00000516614 102 ntBASIC1.21□□□□□ -2.22
PHOX2BQ99453 AC243829.6-201ENST00000612652 106 ntBASIC1.21□□□□□ -2.22
PHOX2BQ99453 RNU6-141P-201ENST00000410499 105 ntBASIC1.2□□□□□ -2.22
PHOX2BQ99453 SNORD60.1-201ENST00000362451 73 ntBASIC1.19□□□□□ -2.22
PHOX2BQ99453 RNU6-829P-201ENST00000363700 112 ntBASIC1.19□□□□□ -2.22
PHOX2BQ99453 MIR516B1-201ENST00000385211 90 ntBASIC1.19□□□□□ -2.22
PHOX2BQ99453 RNU6-863P-201ENST00000515989 104 ntBASIC1.18□□□□□ -2.22
PHOX2BQ99453 CYP3A54P-201ENST00000566950 75 ntBASIC1.18□□□□□ -2.22
PHOX2BQ99453 RNU1-29P-201ENST00000606574 126 ntBASIC1.18□□□□□ -2.22
PHOX2BQ99453 MIR8087-201ENST00000612745 78 ntBASIC1.18□□□□□ -2.22
PHOX2BQ99453 MIR3973-201ENST00000579824 107 ntBASIC1.17□□□□□ -2.22
PHOX2BQ99453 SNORA25.18-201ENST00000607153 114 ntBASIC1.17□□□□□ -2.22
PHOX2BQ99453 MIR518A1-201ENST00000385068 85 ntBASIC1.16□□□□□ -2.22
PHOX2BQ99453 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
PHOX2BQ99453 ACA64.5-201ENST00000516207 127 ntBASIC1.16□□□□□ -2.22
PHOX2BQ99453 SNORD114-23-201ENST00000363536 72 ntBASIC1.15□□□□□ -2.23
PHOX2BQ99453 Y_RNA.246-201ENST00000364495 108 ntBASIC1.15□□□□□ -2.23
PHOX2BQ99453 MIR4714-201ENST00000580728 77 ntBASIC1.15□□□□□ -2.23
PHOX2BQ99453 RNY1P8-201ENST00000383970 114 ntBASIC1.14□□□□□ -2.23
PHOX2BQ99453 MIR1197-201ENST00000408818 88 ntBASIC1.14□□□□□ -2.23
PHOX2BQ99453 AC010487.4-201ENST00000637027 61 ntBASIC1.14□□□□□ -2.23
PHOX2BQ99453 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 326.1 ms