Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MIR548N-201ENST00000408742 75 ntBASIC-3.99□□□□□ -3.05
CCDC58Q4VC31 AL731768.1-201ENST00000603124 139 ntBASIC-3.99□□□□□ -3.05
CCDC58Q4VC31 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.99□□□□□ -3.05
CCDC58Q4VC31 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.99□□□□□ -3.05
CCDC58Q4VC31 Y_RNA.9-201ENST00000362354 101 ntBASIC-4□□□□□ -3.05
CCDC58Q4VC31 Y_RNA.154-201ENST00000363624 102 ntBASIC-4□□□□□ -3.05
CCDC58Q4VC31 RNU6-309P-201ENST00000364573 106 ntBASIC-4□□□□□ -3.05
CCDC58Q4VC31 Y_RNA.467-201ENST00000384297 102 ntBASIC-4□□□□□ -3.05
CCDC58Q4VC31 RNU6-523P-201ENST00000516304 54 ntBASIC-4□□□□□ -3.05
CCDC58Q4VC31 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-4□□□□□ -3.05
CCDC58Q4VC31 SNORD60-201ENST00000383903 83 ntBASIC-4.02□□□□□ -3.05
CCDC58Q4VC31 Y_RNA.485-201ENST00000384395 102 ntBASIC-4.02□□□□□ -3.05
CCDC58Q4VC31 RNU6-578P-201ENST00000390980 103 ntBASIC-4.02□□□□□ -3.05
CCDC58Q4VC31 AC080013.6-201ENST00000606185 215 ntBASIC-4.02□□□□□ -3.05
CCDC58Q4VC31 RNU6-644P-201ENST00000391155 98 ntBASIC-4.03□□□□□ -3.05
CCDC58Q4VC31 RNU6-506P-201ENST00000516553 94 ntBASIC-4.03□□□□□ -3.05
CCDC58Q4VC31 RNU6-1121P-201ENST00000516802 109 ntBASIC-4.03□□□□□ -3.05
CCDC58Q4VC31 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-4.03□□□□□ -3.05
CCDC58Q4VC31 AC090574.1-201ENST00000623186 233 ntBASIC-4.03□□□□□ -3.05
CCDC58Q4VC31 MIRLET7A3-201ENST00000362116 74 ntBASIC-4.04□□□□□ -3.06
CCDC58Q4VC31 Y_RNA.566-201ENST00000384735 101 ntBASIC-4.04□□□□□ -3.06
CCDC58Q4VC31 MIR548D2-201ENST00000384955 97 ntBASIC-4.04□□□□□ -3.06
CCDC58Q4VC31 RNU6-519P-201ENST00000410590 108 ntBASIC-4.04□□□□□ -3.06
CCDC58Q4VC31 RNU7-30P-201ENST00000516835 62 ntBASIC-4.04□□□□□ -3.06
CCDC58Q4VC31 RNU7-151P-201ENST00000516930 53 ntBASIC-4.04□□□□□ -3.06
CCDC58Q4VC31 RNU6-698P-201ENST00000363523 107 ntBASIC-4.05□□□□□ -3.06
CCDC58Q4VC31 RNU6-912P-201ENST00000363800 104 ntBASIC-4.05□□□□□ -3.06
CCDC58Q4VC31 RNU6-34P-201ENST00000364874 107 ntBASIC-4.05□□□□□ -3.06
CCDC58Q4VC31 Y_RNA.395-201ENST00000383945 109 ntBASIC-4.05□□□□□ -3.06
CCDC58Q4VC31 SNORD116-1-201ENST00000384335 95 ntBASIC-4.05□□□□□ -3.06
CCDC58Q4VC31 SNORD1B-201ENST00000363091 84 ntBASIC-4.06□□□□□ -3.06
CCDC58Q4VC31 RNU6-818P-201ENST00000364837 108 ntBASIC-4.06□□□□□ -3.06
CCDC58Q4VC31 RNU6-974P-201ENST00000384099 108 ntBASIC-4.06□□□□□ -3.06
CCDC58Q4VC31 Y_RNA.507-201ENST00000384500 99 ntBASIC-4.06□□□□□ -3.06
CCDC58Q4VC31 MIR202-201ENST00000362219 110 ntBASIC-4.07□□□□□ -3.06
CCDC58Q4VC31 Y_RNA.401-201ENST00000383965 117 ntBASIC-4.07□□□□□ -3.06
CCDC58Q4VC31 RNU6-530P-201ENST00000391180 107 ntBASIC-4.07□□□□□ -3.06
CCDC58Q4VC31 RNU6-121P-201ENST00000410525 99 ntBASIC-4.07□□□□□ -3.06
CCDC58Q4VC31 SNORA63.7-201ENST00000365579 123 ntBASIC-4.08□□□□□ -3.06
CCDC58Q4VC31 SNORD116-16-201ENST00000384533 92 ntBASIC-4.08□□□□□ -3.06
CCDC58Q4VC31 Y_RNA.661-201ENST00000516003 99 ntBASIC-4.08□□□□□ -3.06
CCDC58Q4VC31 AC002553.4-201ENST00000616896 331 ntBASIC-4.08□□□□□ -3.06
CCDC58Q4VC31 MIR7978-201ENST00000636158 59 ntBASIC-4.08□□□□□ -3.06
CCDC58Q4VC31 MIR513C-201ENST00000401352 84 ntBASIC-4.09□□□□□ -3.06
CCDC58Q4VC31 AC025166.1-201ENST00000612411 163 ntBASIC-4.1□□□□□ -3.07
CCDC58Q4VC31 Y_RNA.198-201ENST00000364013 98 ntBASIC-4.11□□□□□ -3.07
CCDC58Q4VC31 Y_RNA.213-201ENST00000364178 111 ntBASIC-4.11□□□□□ -3.07
CCDC58Q4VC31 RNU6-649P-201ENST00000384463 107 ntBASIC-4.11□□□□□ -3.07
CCDC58Q4VC31 MIR579-201ENST00000385221 98 ntBASIC-4.11□□□□□ -3.07
CCDC58Q4VC31 MIR125B1-201ENST00000385236 88 ntBASIC-4.11□□□□□ -3.07
CCDC58Q4VC31 MTND3P3-201ENST00000505004 126 ntBASIC-4.11□□□□□ -3.07
CCDC58Q4VC31 MIR548V-201ENST00000584165 80 ntBASIC-4.11□□□□□ -3.07
CCDC58Q4VC31 Y_RNA.16-201ENST00000362421 102 ntBASIC-4.12□□□□□ -3.07
CCDC58Q4VC31 Y_RNA.266-201ENST00000364678 96 ntBASIC-4.12□□□□□ -3.07
CCDC58Q4VC31 Y_RNA.321-201ENST00000365149 102 ntBASIC-4.12□□□□□ -3.07
CCDC58Q4VC31 SNORD116-2-201ENST00000384274 95 ntBASIC-4.12□□□□□ -3.07
CCDC58Q4VC31 Y_RNA.511-201ENST00000384514 103 ntBASIC-4.12□□□□□ -3.07
CCDC58Q4VC31 RNU6-520P-201ENST00000384717 104 ntBASIC-4.12□□□□□ -3.07
CCDC58Q4VC31 MIR577-201ENST00000385196 96 ntBASIC-4.12□□□□□ -3.07
CCDC58Q4VC31 RNU6-770P-201ENST00000363929 105 ntBASIC-4.13□□□□□ -3.07
CCDC58Q4VC31 Y_RNA.252-201ENST00000364556 101 ntBASIC-4.13□□□□□ -3.07
CCDC58Q4VC31 Y_RNA.434-201ENST00000384090 100 ntBASIC-4.13□□□□□ -3.07
CCDC58Q4VC31 Y_RNA.455-201ENST00000384230 98 ntBASIC-4.13□□□□□ -3.07
CCDC58Q4VC31 RNU6-768P-201ENST00000384683 107 ntBASIC-4.13□□□□□ -3.07
CCDC58Q4VC31 MIR509-1-201ENST00000385265 94 ntBASIC-4.13□□□□□ -3.07
CCDC58Q4VC31 MIR509-2-201ENST00000390724 91 ntBASIC-4.13□□□□□ -3.07
CCDC58Q4VC31 RNU6-68P-201ENST00000516576 104 ntBASIC-4.13□□□□□ -3.07
CCDC58Q4VC31 AC103810.7-201ENST00000607821 91 ntBASIC-4.13□□□□□ -3.07
CCDC58Q4VC31 SNORD113-2-201ENST00000391082 72 ntBASIC-4.14□□□□□ -3.07
CCDC58Q4VC31 MIR548AJ2-201ENST00000408539 92 ntBASIC-4.14□□□□□ -3.07
CCDC58Q4VC31 AC078883.4-201ENST00000623218 367 ntBASIC-4.15□□□□□ -3.07
CCDC58Q4VC31 MIR369-201ENST00000362155 70 ntBASIC-4.16□□□□□ -3.08
CCDC58Q4VC31 Y_RNA.307-201ENST00000365022 117 ntBASIC-4.16□□□□□ -3.08
CCDC58Q4VC31 RNU6-1044P-201ENST00000384755 107 ntBASIC-4.16□□□□□ -3.08
CCDC58Q4VC31 RNU6-816P-201ENST00000390914 107 ntBASIC-4.16□□□□□ -3.08
CCDC58Q4VC31 RNU6-1268P-201ENST00000391214 107 ntBASIC-4.16□□□□□ -3.08
CCDC58Q4VC31 RNU6-1239P-201ENST00000391310 107 ntBASIC-4.16□□□□□ -3.08
CCDC58Q4VC31 MIR379-201ENST00000362218 67 ntBASIC-4.17□□□□□ -3.08
CCDC58Q4VC31 Y_RNA.44-201ENST00000362676 108 ntBASIC-4.17□□□□□ -3.08
CCDC58Q4VC31 SNORD18B-201ENST00000365659 72 ntBASIC-4.17□□□□□ -3.08
CCDC58Q4VC31 SNORA17.4-201ENST00000391287 132 ntBASIC-4.17□□□□□ -3.08
CCDC58Q4VC31 Y_RNA.797-201ENST00000515977 94 ntBASIC-4.17□□□□□ -3.08
CCDC58Q4VC31 Y_RNA.63-201ENST00000362841 102 ntBASIC-4.18□□□□□ -3.08
CCDC58Q4VC31 RNU6-681P-201ENST00000364012 104 ntBASIC-4.18□□□□□ -3.08
CCDC58Q4VC31 MIR1302-11-201ENST00000408051 138 ntBASIC-4.18□□□□□ -3.08
CCDC58Q4VC31 MIR1254-1-201ENST00000408257 97 ntBASIC-4.18□□□□□ -3.08
CCDC58Q4VC31 MIR1302-9-201ENST00000408365 138 ntBASIC-4.18□□□□□ -3.08
CCDC58Q4VC31 MIR1302-10-201ENST00000408734 138 ntBASIC-4.18□□□□□ -3.08
CCDC58Q4VC31 Y_RNA.612-201ENST00000410717 95 ntBASIC-4.18□□□□□ -3.08
CCDC58Q4VC31 MIR4796-201ENST00000580742 81 ntBASIC-4.18□□□□□ -3.08
CCDC58Q4VC31 MIR1302-2-201ENST00000607096 138 ntBASIC-4.18□□□□□ -3.08
CCDC58Q4VC31 Y_RNA.139-201ENST00000363464 102 ntBASIC-4.19□□□□□ -3.08
CCDC58Q4VC31 Y_RNA.259-201ENST00000364619 101 ntBASIC-4.19□□□□□ -3.08
CCDC58Q4VC31 RNU2-16P-201ENST00000410712 136 ntBASIC-4.19□□□□□ -3.08
CCDC58Q4VC31 AL450471.1-201ENST00000447509 127 ntBASIC-4.19□□□□□ -3.08
CCDC58Q4VC31 MIR4439-201ENST00000583746 80 ntBASIC-4.19□□□□□ -3.08
CCDC58Q4VC31 MIR3149-201ENST00000584629 83 ntBASIC-4.19□□□□□ -3.08
CCDC58Q4VC31 Y_RNA.262-201ENST00000364641 102 ntBASIC-4.2□□□□□ -3.08
CCDC58Q4VC31 RNU6-987P-201ENST00000384759 104 ntBASIC-4.2□□□□□ -3.08
CCDC58Q4VC31 SNORA41B-201ENST00000384785 128 ntBASIC-4.2□□□□□ -3.08
Retrieved 100 of 98,524 protein–RNA pairs in 227.1 ms