Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SNORD116-1-201ENST00000384335 95 ntBASIC-4.33□□□□□ -3.1
HMGA1P17096 MIR122-201ENST00000385044 85 ntBASIC-4.33□□□□□ -3.1
HMGA1P17096 RNU5E-3P-201ENST00000515913 68 ntBASIC-4.33□□□□□ -3.1
HMGA1P17096 RNU6-752P-201ENST00000516376 102 ntBASIC-4.33□□□□□ -3.1
HMGA1P17096 SNORA20.3-201ENST00000516880 132 ntBASIC-4.33□□□□□ -3.1
HMGA1P17096 NBR2-204ENST00000587322 63 ntBASIC-4.33□□□□□ -3.1
HMGA1P17096 Y_RNA.88-201ENST00000363029 99 ntBASIC-4.34□□□□□ -3.1
HMGA1P17096 Y_RNA.321-201ENST00000365149 102 ntBASIC-4.34□□□□□ -3.1
HMGA1P17096 RNU6-483P-201ENST00000384088 108 ntBASIC-4.34□□□□□ -3.1
HMGA1P17096 RNU6-1289P-201ENST00000384431 106 ntBASIC-4.34□□□□□ -3.1
HMGA1P17096 RNU6-1009P-201ENST00000390996 107 ntBASIC-4.34□□□□□ -3.1
HMGA1P17096 AC025253.1-201ENST00000613623 543 ntBASIC-4.34□□□□□ -3.1
HMGA1P17096 MIR4272-201ENST00000635924 64 ntBASIC-4.34□□□□□ -3.1
HMGA1P17096 RNU6-890P-201ENST00000384121 107 ntBASIC-4.35□□□□□ -3.11
HMGA1P17096 Y_RNA.646-201ENST00000410980 101 ntBASIC-4.35□□□□□ -3.11
HMGA1P17096 RNU6-1271P-201ENST00000517049 105 ntBASIC-4.35□□□□□ -3.11
HMGA1P17096 MIR548AH-201ENST00000637109 76 ntBASIC-4.35□□□□□ -3.11
HMGA1P17096 Y_RNA.320-201ENST00000365144 102 ntBASIC-4.36□□□□□ -3.11
HMGA1P17096 MIR125B1-201ENST00000385236 88 ntBASIC-4.36□□□□□ -3.11
HMGA1P17096 RNU6-373P-201ENST00000411247 98 ntBASIC-4.36□□□□□ -3.11
HMGA1P17096 Y_RNA.129-201ENST00000363392 110 ntBASIC-4.37□□□□□ -3.11
HMGA1P17096 RNU6-361P-201ENST00000364454 107 ntBASIC-4.37□□□□□ -3.11
HMGA1P17096 RNU6-290P-201ENST00000365212 101 ntBASIC-4.37□□□□□ -3.11
HMGA1P17096 Y_RNA.718-201ENST00000517110 102 ntBASIC-4.37□□□□□ -3.11
HMGA1P17096 SNORD1B-201ENST00000363091 84 ntBASIC-4.38□□□□□ -3.11
HMGA1P17096 RNU6-770P-201ENST00000363929 105 ntBASIC-4.38□□□□□ -3.11
HMGA1P17096 RNU6-818P-201ENST00000364837 108 ntBASIC-4.38□□□□□ -3.11
HMGA1P17096 MIR124-1-201ENST00000385275 85 ntBASIC-4.38□□□□□ -3.11
HMGA1P17096 AC002553.4-201ENST00000616896 331 ntBASIC-4.38□□□□□ -3.11
HMGA1P17096 MIR7978-201ENST00000636158 59 ntBASIC-4.38□□□□□ -3.11
HMGA1P17096 AC024614.3-201ENST00000637860 256 ntBASIC-4.38□□□□□ -3.11
HMGA1P17096 RNU6-854P-201ENST00000364036 107 ntBASIC-4.39□□□□□ -3.11
HMGA1P17096 RNU6-1124P-201ENST00000384169 107 ntBASIC-4.39□□□□□ -3.11
HMGA1P17096 MIR579-201ENST00000385221 98 ntBASIC-4.39□□□□□ -3.11
HMGA1P17096 MTND1P29-201ENST00000448112 647 ntBASIC-4.39□□□□□ -3.11
HMGA1P17096 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-4.39□□□□□ -3.11
HMGA1P17096 AC025166.1-201ENST00000612411 163 ntBASIC-4.39□□□□□ -3.11
HMGA1P17096 RNU6-1169P-201ENST00000363537 103 ntBASIC-4.4□□□□□ -3.11
HMGA1P17096 RNU6-1113P-201ENST00000384348 107 ntBASIC-4.4□□□□□ -3.11
HMGA1P17096 AC099799.1-201ENST00000439809 192 ntBASIC-4.4□□□□□ -3.11
HMGA1P17096 Y_RNA.139-201ENST00000363464 102 ntBASIC-4.41□□□□□ -3.12
HMGA1P17096 RNU6-103P-201ENST00000363686 107 ntBASIC-4.41□□□□□ -3.12
HMGA1P17096 RN7SKP298-201ENST00000515950 94 ntBASIC-4.41□□□□□ -3.12
HMGA1P17096 MIR4744-201ENST00000581563 82 ntBASIC-4.41□□□□□ -3.12
HMGA1P17096 RNU6-326P-201ENST00000365480 107 ntBASIC-4.43□□□□□ -3.12
HMGA1P17096 MIR548D2-201ENST00000384955 97 ntBASIC-4.43□□□□□ -3.12
HMGA1P17096 U4.4-201ENST00000620626 117 ntBASIC-4.43□□□□□ -3.12
HMGA1P17096 SNORD116-2-201ENST00000384274 95 ntBASIC-4.44□□□□□ -3.12
HMGA1P17096 Y_RNA.213-201ENST00000364178 111 ntBASIC-4.45□□□□□ -3.12
HMGA1P17096 RNU6-1119P-201ENST00000384349 108 ntBASIC-4.45□□□□□ -3.12
HMGA1P17096 RNU6-781P-201ENST00000516377 101 ntBASIC-4.45□□□□□ -3.12
HMGA1P17096 MIR3144-201ENST00000579460 79 ntBASIC-4.45□□□□□ -3.12
HMGA1P17096 AL050303.3-201ENST00000613704 284 ntBASIC-4.45□□□□□ -3.12
HMGA1P17096 RNU6-578P-201ENST00000390980 103 ntBASIC-4.46□□□□□ -3.12
HMGA1P17096 RNU6-699P-201ENST00000517081 110 ntBASIC-4.46□□□□□ -3.12
HMGA1P17096 Y_RNA.339-201ENST00000365325 102 ntBASIC-4.47□□□□□ -3.13
HMGA1P17096 SNORD18B-201ENST00000365659 72 ntBASIC-4.47□□□□□ -3.13
HMGA1P17096 Y_RNA.709-201ENST00000516952 92 ntBASIC-4.47□□□□□ -3.13
HMGA1P17096 AC103810.7-201ENST00000607821 91 ntBASIC-4.47□□□□□ -3.13
HMGA1P17096 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-4.47□□□□□ -3.13
HMGA1P17096 Y_RNA.11-201ENST00000362375 109 ntBASIC-4.48□□□□□ -3.13
HMGA1P17096 SNORD116-16-201ENST00000384533 92 ntBASIC-4.48□□□□□ -3.13
HMGA1P17096 Y_RNA.581-201ENST00000391017 97 ntBASIC-4.48□□□□□ -3.13
HMGA1P17096 RNU6-644P-201ENST00000391155 98 ntBASIC-4.48□□□□□ -3.13
HMGA1P17096 MIR548V-201ENST00000584165 80 ntBASIC-4.48□□□□□ -3.13
HMGA1P17096 AC015540.1-201ENST00000615828 501 ntBASIC-4.48□□□□□ -3.13
HMGA1P17096 RNU6-768P-201ENST00000384683 107 ntBASIC-4.49□□□□□ -3.13
HMGA1P17096 Y_RNA.606-201ENST00000410579 103 ntBASIC-4.49□□□□□ -3.13
HMGA1P17096 Y_RNA.445-201ENST00000384168 102 ntBASIC-4.51□□□□□ -3.13
HMGA1P17096 MIR559-201ENST00000385188 96 ntBASIC-4.51□□□□□ -3.13
HMGA1P17096 Y_RNA.275-201ENST00000364726 110 ntBASIC-4.52□□□□□ -3.13
HMGA1P17096 Y_RNA.478-201ENST00000384358 107 ntBASIC-4.52□□□□□ -3.13
HMGA1P17096 SNORD116-6-201ENST00000384711 96 ntBASIC-4.52□□□□□ -3.13
HMGA1P17096 SNORD115-46-201ENST00000390982 71 ntBASIC-4.52□□□□□ -3.13
HMGA1P17096 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-4.52□□□□□ -3.13
HMGA1P17096 AC090574.1-201ENST00000623186 233 ntBASIC-4.52□□□□□ -3.13
HMGA1P17096 RNU6-698P-201ENST00000363523 107 ntBASIC-4.53□□□□□ -3.13
HMGA1P17096 RNU6-34P-201ENST00000364874 107 ntBASIC-4.53□□□□□ -3.13
HMGA1P17096 RNU4-14P-201ENST00000410858 122 ntBASIC-4.53□□□□□ -3.13
HMGA1P17096 RNU6-590P-201ENST00000365039 107 ntBASIC-4.54□□□□□ -3.14
HMGA1P17096 AL450471.1-201ENST00000447509 127 ntBASIC-4.54□□□□□ -3.14
HMGA1P17096 Y_RNA.686-201ENST00000516548 134 ntBASIC-4.54□□□□□ -3.14
HMGA1P17096 AC104985.2-201ENST00000620598 500 ntBASIC-4.54□□□□□ -3.14
HMGA1P17096 Y_RNA.485-201ENST00000384395 102 ntBASIC-4.55□□□□□ -3.14
HMGA1P17096 MIR577-201ENST00000385196 96 ntBASIC-4.55□□□□□ -3.14
HMGA1P17096 Y_RNA.16-201ENST00000362421 102 ntBASIC-4.56□□□□□ -3.14
HMGA1P17096 Y_RNA.198-201ENST00000364013 98 ntBASIC-4.56□□□□□ -3.14
HMGA1P17096 Y_RNA.455-201ENST00000384230 98 ntBASIC-4.56□□□□□ -3.14
HMGA1P17096 MIR630-201ENST00000384957 97 ntBASIC-4.56□□□□□ -3.14
HMGA1P17096 MIR4796-201ENST00000580742 81 ntBASIC-4.56□□□□□ -3.14
HMGA1P17096 Z99129.1-201ENST00000612510 255 ntBASIC-4.57□□□□□ -3.14
HMGA1P17096 Y_RNA.154-201ENST00000363624 102 ntBASIC-4.58□□□□□ -3.14
HMGA1P17096 RNU6-1188P-201ENST00000363795 107 ntBASIC-4.58□□□□□ -3.14
HMGA1P17096 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-4.58□□□□□ -3.14
HMGA1P17096 Y_RNA.661-201ENST00000516003 99 ntBASIC-4.58□□□□□ -3.14
HMGA1P17096 Y_RNA.680-201ENST00000516441 93 ntBASIC-4.58□□□□□ -3.14
HMGA1P17096 SNORD113-2-201ENST00000391082 72 ntBASIC-4.59□□□□□ -3.14
HMGA1P17096 MTND4P17-201ENST00000470444 350 ntBASIC-4.59□□□□□ -3.14
HMGA1P17096 AC124864.2-201ENST00000624736 186 ntBASIC-4.59□□□□□ -3.14
HMGA1P17096 MIR4426-201ENST00000640330 63 ntBASIC-4.59□□□□□ -3.14
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms