Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.76□□□□□ -2.69
CCDC112Q8NEF3 RNU6-382P-201ENST00000365181 106 ntBASIC-1.76□□□□□ -2.69
CCDC112Q8NEF3 MIR1285-2-201ENST00000408311 88 ntBASIC-1.76□□□□□ -2.69
CCDC112Q8NEF3 SNORA81.3-201ENST00000517283 198 ntBASIC-1.76□□□□□ -2.69
CCDC112Q8NEF3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.76□□□□□ -2.69
CCDC112Q8NEF3 SNORD90-201ENST00000391145 111 ntBASIC-1.77□□□□□ -2.69
CCDC112Q8NEF3 AL158147.1-201ENST00000443970 75 ntBASIC-1.77□□□□□ -2.69
CCDC112Q8NEF3 RNU6-62P-201ENST00000516526 102 ntBASIC-1.77□□□□□ -2.69
CCDC112Q8NEF3 RNU6-111P-201ENST00000517179 105 ntBASIC-1.77□□□□□ -2.69
CCDC112Q8NEF3 CYP3A54P-201ENST00000566950 75 ntBASIC-1.77□□□□□ -2.69
CCDC112Q8NEF3 MIR3128-201ENST00000581957 66 ntBASIC-1.77□□□□□ -2.69
CCDC112Q8NEF3 AC138207.3-201ENST00000585289 166 ntBASIC-1.77□□□□□ -2.69
CCDC112Q8NEF3 AC006254.2-201ENST00000603259 279 ntBASIC-1.77□□□□□ -2.69
CCDC112Q8NEF3 RNU6-832P-201ENST00000363319 107 ntBASIC-1.78□□□□□ -2.69
CCDC112Q8NEF3 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.78□□□□□ -2.69
CCDC112Q8NEF3 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.78□□□□□ -2.69
CCDC112Q8NEF3 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.78□□□□□ -2.69
CCDC112Q8NEF3 AL117187.1-201ENST00000555482 181 ntBASIC-1.78□□□□□ -2.69
CCDC112Q8NEF3 AP001340.1-201ENST00000624405 217 ntBASIC-1.78□□□□□ -2.69
CCDC112Q8NEF3 RNU6-151P-201ENST00000364158 107 ntBASIC-1.79□□□□□ -2.7
CCDC112Q8NEF3 RNA5SP292-201ENST00000390974 118 ntBASIC-1.79□□□□□ -2.7
CCDC112Q8NEF3 RNU6-644P-201ENST00000391155 98 ntBASIC-1.79□□□□□ -2.7
CCDC112Q8NEF3 MIR1207-201ENST00000408249 87 ntBASIC-1.79□□□□□ -2.7
CCDC112Q8NEF3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.79□□□□□ -2.7
CCDC112Q8NEF3 RNA5SP147-201ENST00000516493 109 ntBASIC-1.79□□□□□ -2.7
CCDC112Q8NEF3 MIR3613-201ENST00000579844 87 ntBASIC-1.79□□□□□ -2.7
CCDC112Q8NEF3 MIR4439-201ENST00000583746 80 ntBASIC-1.79□□□□□ -2.7
CCDC112Q8NEF3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.79□□□□□ -2.7
CCDC112Q8NEF3 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.8□□□□□ -2.7
CCDC112Q8NEF3 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.8□□□□□ -2.7
CCDC112Q8NEF3 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.8□□□□□ -2.7
CCDC112Q8NEF3 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.8□□□□□ -2.7
CCDC112Q8NEF3 HLA-S-202ENST00000425174 53 ntBASIC-1.8□□□□□ -2.7
CCDC112Q8NEF3 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.8□□□□□ -2.7
CCDC112Q8NEF3 AC026421.1-201ENST00000519101 163 ntBASIC-1.8□□□□□ -2.7
CCDC112Q8NEF3 MIR4441-201ENST00000582623 100 ntBASIC-1.8□□□□□ -2.7
CCDC112Q8NEF3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.8□□□□□ -2.7
CCDC112Q8NEF3 AC072026.1-201ENST00000605023 201 ntBASIC-1.8□□□□□ -2.7
CCDC112Q8NEF3 SNORA2.1-201ENST00000363089 137 ntBASIC-1.81□□□□□ -2.7
CCDC112Q8NEF3 SNORD115-22-201ENST00000364456 82 ntBASIC-1.81□□□□□ -2.7
CCDC112Q8NEF3 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.81□□□□□ -2.7
CCDC112Q8NEF3 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.81□□□□□ -2.7
CCDC112Q8NEF3 RNU6-576P-201ENST00000390854 102 ntBASIC-1.81□□□□□ -2.7
CCDC112Q8NEF3 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.81□□□□□ -2.7
CCDC112Q8NEF3 RNY3P2-201ENST00000362918 102 ntBASIC-1.82□□□□□ -2.7
CCDC112Q8NEF3 MIR203A-201ENST00000384836 110 ntBASIC-1.82□□□□□ -2.7
CCDC112Q8NEF3 MIR527-201ENST00000385244 85 ntBASIC-1.82□□□□□ -2.7
CCDC112Q8NEF3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
CCDC112Q8NEF3 RNU4-61P-201ENST00000411243 107 ntBASIC-1.82□□□□□ -2.7
CCDC112Q8NEF3 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.82□□□□□ -2.7
CCDC112Q8NEF3 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.82□□□□□ -2.7
CCDC112Q8NEF3 MIR548Z-201ENST00000584743 97 ntBASIC-1.82□□□□□ -2.7
CCDC112Q8NEF3 MIR3657-201ENST00000584818 117 ntBASIC-1.82□□□□□ -2.7
CCDC112Q8NEF3 MIR6509-201ENST00000614603 85 ntBASIC-1.82□□□□□ -2.7
CCDC112Q8NEF3 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.83□□□□□ -2.7
CCDC112Q8NEF3 SNORA18.5-201ENST00000516616 101 ntBASIC-1.83□□□□□ -2.7
CCDC112Q8NEF3 AC044792.1-201ENST00000593294 196 ntBASIC-1.83□□□□□ -2.7
CCDC112Q8NEF3 AC103810.7-201ENST00000607821 91 ntBASIC-1.83□□□□□ -2.7
CCDC112Q8NEF3 AC025166.1-201ENST00000612411 163 ntBASIC-1.83□□□□□ -2.7
CCDC112Q8NEF3 RNA5SP26-201ENST00000362406 119 ntBASIC-1.84□□□□□ -2.7
CCDC112Q8NEF3 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.84□□□□□ -2.7
CCDC112Q8NEF3 RNU6-824P-201ENST00000363724 104 ntBASIC-1.84□□□□□ -2.7
CCDC112Q8NEF3 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.84□□□□□ -2.7
CCDC112Q8NEF3 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.84□□□□□ -2.7
CCDC112Q8NEF3 MTATP6P29-201ENST00000415057 132 ntBASIC-1.84□□□□□ -2.7
CCDC112Q8NEF3 RNU6-158P-201ENST00000517104 100 ntBASIC-1.84□□□□□ -2.7
CCDC112Q8NEF3 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.84□□□□□ -2.7
CCDC112Q8NEF3 MIR4773-1-201ENST00000637203 78 ntBASIC-1.84□□□□□ -2.7
CCDC112Q8NEF3 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.85□□□□□ -2.71
CCDC112Q8NEF3 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.85□□□□□ -2.71
CCDC112Q8NEF3 MIR8485-201ENST00000401372 91 ntBASIC-1.85□□□□□ -2.71
CCDC112Q8NEF3 RNU2-51P-201ENST00000410708 197 ntBASIC-1.85□□□□□ -2.71
CCDC112Q8NEF3 RNU7-154P-201ENST00000516194 62 ntBASIC-1.85□□□□□ -2.71
CCDC112Q8NEF3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.85□□□□□ -2.71
CCDC112Q8NEF3 RNU6-226P-201ENST00000363778 107 ntBASIC-1.86□□□□□ -2.71
CCDC112Q8NEF3 SNORA20.1-201ENST00000364790 130 ntBASIC-1.86□□□□□ -2.71
CCDC112Q8NEF3 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.86□□□□□ -2.71
CCDC112Q8NEF3 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.86□□□□□ -2.71
CCDC112Q8NEF3 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.86□□□□□ -2.71
CCDC112Q8NEF3 RNU6-813P-201ENST00000384691 107 ntBASIC-1.86□□□□□ -2.71
CCDC112Q8NEF3 SNORD58C-201ENST00000365223 64 ntBASIC-1.87□□□□□ -2.71
CCDC112Q8NEF3 MIR513C-201ENST00000401352 84 ntBASIC-1.87□□□□□ -2.71
CCDC112Q8NEF3 MIR548I1-201ENST00000408810 149 ntBASIC-1.87□□□□□ -2.71
CCDC112Q8NEF3 RNU6-519P-201ENST00000410590 108 ntBASIC-1.87□□□□□ -2.71
CCDC112Q8NEF3 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.88□□□□□ -2.71
CCDC112Q8NEF3 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.88□□□□□ -2.71
CCDC112Q8NEF3 MIR521-2-201ENST00000384818 87 ntBASIC-1.88□□□□□ -2.71
CCDC112Q8NEF3 MIR519A2-201ENST00000384990 87 ntBASIC-1.88□□□□□ -2.71
CCDC112Q8NEF3 AL353691.2-201ENST00000443795 59 ntBASIC-1.88□□□□□ -2.71
CCDC112Q8NEF3 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.88□□□□□ -2.71
CCDC112Q8NEF3 MIR4679-2-201ENST00000578358 77 ntBASIC-1.88□□□□□ -2.71
CCDC112Q8NEF3 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.89□□□□□ -2.71
CCDC112Q8NEF3 SNORD45B-201ENST00000364617 72 ntBASIC-1.89□□□□□ -2.71
CCDC112Q8NEF3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.89□□□□□ -2.71
CCDC112Q8NEF3 U7.2-201ENST00000607576 63 ntBASIC-1.89□□□□□ -2.71
CCDC112Q8NEF3 AC062037.2-201ENST00000610137 73 ntBASIC-1.89□□□□□ -2.71
CCDC112Q8NEF3 AL035470.1-201ENST00000622571 220 ntBASIC-1.89□□□□□ -2.71
CCDC112Q8NEF3 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.9□□□□□ -2.71
CCDC112Q8NEF3 AL691482.2-201ENST00000457453 84 ntBASIC-1.9□□□□□ -2.71
CCDC112Q8NEF3 MIR5591-201ENST00000578248 65 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 383.8 ms