Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 RNU6-1039P-201ENST00000383931 107 ntBASIC0.77□□□□□ -2.29
SNHG28P0DPA3 MIR154-201ENST00000385243 84 ntBASIC0.77□□□□□ -2.29
SNHG28P0DPA3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
SNHG28P0DPA3 RNA5SP484-201ENST00000458857 111 ntBASIC0.77□□□□□ -2.29
SNHG28P0DPA3 RNU7-24P-201ENST00000458867 62 ntBASIC0.77□□□□□ -2.29
SNHG28P0DPA3 RNU5B-6P-201ENST00000516765 68 ntBASIC0.77□□□□□ -2.29
SNHG28P0DPA3 RNU1-141P-201ENST00000364623 158 ntBASIC0.76□□□□□ -2.29
SNHG28P0DPA3 MIR200A-201ENST00000384875 90 ntBASIC0.76□□□□□ -2.29
SNHG28P0DPA3 MT-TY-201ENST00000387409 66 ntBASIC0.76□□□□□ -2.29
SNHG28P0DPA3 RNU1-29P-201ENST00000606574 126 ntBASIC0.76□□□□□ -2.29
SNHG28P0DPA3 MIR6734-201ENST00000621166 68 ntBASIC0.76□□□□□ -2.29
SNHG28P0DPA3 SNORD113.1-201ENST00000363280 73 ntBASIC0.75□□□□□ -2.29
SNHG28P0DPA3 RNU6-681P-201ENST00000364012 104 ntBASIC0.75□□□□□ -2.29
SNHG28P0DPA3 SNORD114-24-201ENST00000365029 72 ntBASIC0.75□□□□□ -2.29
SNHG28P0DPA3 RNU6-649P-201ENST00000384463 107 ntBASIC0.75□□□□□ -2.29
SNHG28P0DPA3 RNU6-800P-201ENST00000384473 103 ntBASIC0.75□□□□□ -2.29
SNHG28P0DPA3 RNU6-663P-201ENST00000391105 106 ntBASIC0.75□□□□□ -2.29
SNHG28P0DPA3 SNORD30.1-201ENST00000391309 70 ntBASIC0.75□□□□□ -2.29
SNHG28P0DPA3 RNA5SP436-201ENST00000516020 115 ntBASIC0.75□□□□□ -2.29
SNHG28P0DPA3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.75□□□□□ -2.29
SNHG28P0DPA3 AC005520.4-201ENST00000604337 90 ntBASIC0.75□□□□□ -2.29
SNHG28P0DPA3 AL162376.1-201ENST00000624117 175 ntBASIC0.75□□□□□ -2.29
SNHG28P0DPA3 U6.111-201ENST00000636093 83 ntBASIC0.75□□□□□ -2.29
SNHG28P0DPA3 RNU6-590P-201ENST00000365039 107 ntBASIC0.74□□□□□ -2.29
SNHG28P0DPA3 MIR4752-201ENST00000579672 72 ntBASIC0.74□□□□□ -2.29
SNHG28P0DPA3 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
SNHG28P0DPA3 AL590095.2-201ENST00000604136 117 ntBASIC0.74□□□□□ -2.29
SNHG28P0DPA3 MIR7107-201ENST00000611489 80 ntBASIC0.74□□□□□ -2.29
SNHG28P0DPA3 MIR6509-201ENST00000614603 85 ntBASIC0.74□□□□□ -2.29
SNHG28P0DPA3 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
SNHG28P0DPA3 AL691482.2-201ENST00000457453 84 ntBASIC0.73□□□□□ -2.29
SNHG28P0DPA3 RNU6-274P-201ENST00000459566 107 ntBASIC0.73□□□□□ -2.29
SNHG28P0DPA3 RNU6-871P-201ENST00000516122 100 ntBASIC0.73□□□□□ -2.29
SNHG28P0DPA3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.73□□□□□ -2.29
SNHG28P0DPA3 RNU6-881P-201ENST00000516813 102 ntBASIC0.73□□□□□ -2.29
SNHG28P0DPA3 RNA5SP94-201ENST00000516917 108 ntBASIC0.73□□□□□ -2.29
SNHG28P0DPA3 MIR548AE1-201ENST00000583292 70 ntBASIC0.73□□□□□ -2.29
SNHG28P0DPA3 MIR3657-201ENST00000584818 117 ntBASIC0.73□□□□□ -2.29
SNHG28P0DPA3 SNORA70.25-201ENST00000612741 95 ntBASIC0.73□□□□□ -2.29
SNHG28P0DPA3 RNU6-469P-201ENST00000516253 101 ntBASIC0.72□□□□□ -2.29
SNHG28P0DPA3 MIR7111-201ENST00000619751 72 ntBASIC0.72□□□□□ -2.29
SNHG28P0DPA3 Y_RNA.118-201ENST00000363300 101 ntBASIC0.71□□□□□ -2.3
SNHG28P0DPA3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SNHG28P0DPA3 RNU6-260P-201ENST00000384092 107 ntBASIC0.71□□□□□ -2.3
SNHG28P0DPA3 SNORA8.2-201ENST00000384372 139 ntBASIC0.71□□□□□ -2.3
SNHG28P0DPA3 RNU6-630P-201ENST00000391258 106 ntBASIC0.71□□□□□ -2.3
SNHG28P0DPA3 RNA5SP147-201ENST00000516493 109 ntBASIC0.71□□□□□ -2.3
SNHG28P0DPA3 RNU6-135P-201ENST00000516769 101 ntBASIC0.71□□□□□ -2.3
SNHG28P0DPA3 MIR4460-201ENST00000577862 86 ntBASIC0.71□□□□□ -2.3
SNHG28P0DPA3 AC025627.3-201ENST00000582078 182 ntBASIC0.71□□□□□ -2.3
SNHG28P0DPA3 AL353765.1-201ENST00000605514 183 ntBASIC0.71□□□□□ -2.3
SNHG28P0DPA3 RNA5SP499-201ENST00000363982 119 ntBASIC0.7□□□□□ -2.3
SNHG28P0DPA3 MIR582-201ENST00000365731 98 ntBASIC0.7□□□□□ -2.3
SNHG28P0DPA3 MIR548L-201ENST00000408303 86 ntBASIC0.7□□□□□ -2.3
SNHG28P0DPA3 RNA5SP222-201ENST00000411039 105 ntBASIC0.7□□□□□ -2.3
SNHG28P0DPA3 snoU13.13-201ENST00000458842 104 ntBASIC0.7□□□□□ -2.3
SNHG28P0DPA3 RNU6-752P-201ENST00000516376 102 ntBASIC0.7□□□□□ -2.3
SNHG28P0DPA3 RNA5SP268-201ENST00000516828 124 ntBASIC0.7□□□□□ -2.3
SNHG28P0DPA3 MIR6515-201ENST00000619843 57 ntBASIC0.7□□□□□ -2.3
SNHG28P0DPA3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
SNHG28P0DPA3 RNA5SP517-201ENST00000364724 117 ntBASIC0.69□□□□□ -2.3
SNHG28P0DPA3 Y_RNA.340-201ENST00000365330 92 ntBASIC0.69□□□□□ -2.3
SNHG28P0DPA3 Y_RNA.443-201ENST00000384135 111 ntBASIC0.69□□□□□ -2.3
SNHG28P0DPA3 MIR9-2-201ENST00000384838 87 ntBASIC0.69□□□□□ -2.3
SNHG28P0DPA3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.69□□□□□ -2.3
SNHG28P0DPA3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.69□□□□□ -2.3
SNHG28P0DPA3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
SNHG28P0DPA3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SNHG28P0DPA3 MIR652-201ENST00000385278 98 ntBASIC0.68□□□□□ -2.3
SNHG28P0DPA3 AC069271.1-201ENST00000445577 156 ntBASIC0.68□□□□□ -2.3
SNHG28P0DPA3 RNA5SP227-201ENST00000516184 113 ntBASIC0.68□□□□□ -2.3
SNHG28P0DPA3 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
SNHG28P0DPA3 RNU6-656P-201ENST00000516785 107 ntBASIC0.68□□□□□ -2.3
SNHG28P0DPA3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.68□□□□□ -2.3
SNHG28P0DPA3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.68□□□□□ -2.3
SNHG28P0DPA3 MIR6513-201ENST00000621188 64 ntBASIC0.68□□□□□ -2.3
SNHG28P0DPA3 RNU6-1216P-201ENST00000362590 107 ntBASIC0.67□□□□□ -2.3
SNHG28P0DPA3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.67□□□□□ -2.3
SNHG28P0DPA3 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
SNHG28P0DPA3 MIR8053-201ENST00000613344 75 ntBASIC0.67□□□□□ -2.3
SNHG28P0DPA3 AC069503.3-201ENST00000618674 145 ntBASIC0.67□□□□□ -2.3
SNHG28P0DPA3 RNU6-645P-201ENST00000364649 106 ntBASIC0.66□□□□□ -2.3
SNHG28P0DPA3 RNU6-895P-201ENST00000384125 103 ntBASIC0.66□□□□□ -2.3
SNHG28P0DPA3 MIR216B-201ENST00000390186 82 ntBASIC0.66□□□□□ -2.3
SNHG28P0DPA3 HMGN2P22-201ENST00000427588 175 ntBASIC0.66□□□□□ -2.3
SNHG28P0DPA3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.66□□□□□ -2.3
SNHG28P0DPA3 SNORA25.18-201ENST00000607153 114 ntBASIC0.66□□□□□ -2.3
SNHG28P0DPA3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.66□□□□□ -2.3
SNHG28P0DPA3 AC073869.9-201ENST00000641610 120 ntBASIC0.66□□□□□ -2.3
SNHG28P0DPA3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.65□□□□□ -2.3
SNHG28P0DPA3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.65□□□□□ -2.31
SNHG28P0DPA3 RNU7-74P-201ENST00000459104 62 ntBASIC0.65□□□□□ -2.31
SNHG28P0DPA3 MIR4473-201ENST00000583731 91 ntBASIC0.65□□□□□ -2.31
SNHG28P0DPA3 RNU6-471P-201ENST00000383944 106 ntBASIC0.64□□□□□ -2.31
SNHG28P0DPA3 MIR608-201ENST00000384820 100 ntBASIC0.64□□□□□ -2.31
SNHG28P0DPA3 Y_RNA.633-201ENST00000459107 95 ntBASIC0.64□□□□□ -2.31
SNHG28P0DPA3 PSMC1P5-201ENST00000512850 177 ntBASIC0.64□□□□□ -2.31
SNHG28P0DPA3 SNORA2.1-201ENST00000363089 137 ntBASIC0.63□□□□□ -2.31
SNHG28P0DPA3 SNORA36.2-201ENST00000384004 127 ntBASIC0.63□□□□□ -2.31
SNHG28P0DPA3 AC125388.1-201ENST00000459631 156 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 225.8 ms