Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SNORD114-28-201ENST00000363610 72 ntBASIC-0.51□□□□□ -2.49
SNX3O60493 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.51□□□□□ -2.49
SNX3O60493 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.51□□□□□ -2.49
SNX3O60493 SNORD90-201ENST00000391145 111 ntBASIC-0.51□□□□□ -2.49
SNX3O60493 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.51□□□□□ -2.49
SNX3O60493 AC026421.1-201ENST00000519101 163 ntBASIC-0.51□□□□□ -2.49
SNX3O60493 MIR4645-201ENST00000583158 77 ntBASIC-0.51□□□□□ -2.49
SNX3O60493 MIR6779-201ENST00000617283 64 ntBASIC-0.51□□□□□ -2.49
SNX3O60493 AC132825.6-201ENST00000638861 357 ntBASIC-0.51□□□□□ -2.49
SNX3O60493 SNORD115-25-201ENST00000362619 82 ntBASIC-0.52□□□□□ -2.49
SNX3O60493 RNU6-495P-201ENST00000362995 107 ntBASIC-0.52□□□□□ -2.49
SNX3O60493 RNA5SP257-201ENST00000363023 116 ntBASIC-0.52□□□□□ -2.49
SNX3O60493 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.52□□□□□ -2.49
SNX3O60493 RNU4-32P-201ENST00000363404 141 ntBASIC-0.52□□□□□ -2.49
SNX3O60493 SNORD116-10-201ENST00000363791 102 ntBASIC-0.52□□□□□ -2.49
SNX3O60493 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.52□□□□□ -2.49
SNX3O60493 SNORD2-201ENST00000459163 69 ntBASIC-0.52□□□□□ -2.49
SNX3O60493 AC097510.1-201ENST00000510945 133 ntBASIC-0.52□□□□□ -2.49
SNX3O60493 RNU6-479P-201ENST00000516348 105 ntBASIC-0.52□□□□□ -2.49
SNX3O60493 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.53□□□□□ -2.49
SNX3O60493 SNORD126-201ENST00000459475 77 ntBASIC-0.53□□□□□ -2.49
SNX3O60493 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.53□□□□□ -2.49
SNX3O60493 MIR7111-201ENST00000619751 72 ntBASIC-0.53□□□□□ -2.49
SNX3O60493 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.54□□□□□ -2.5
SNX3O60493 RNY4P3-201ENST00000365254 95 ntBASIC-0.54□□□□□ -2.5
SNX3O60493 RNU6-900P-201ENST00000384498 102 ntBASIC-0.54□□□□□ -2.5
SNX3O60493 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
SNX3O60493 RNU6-313P-201ENST00000516317 112 ntBASIC-0.54□□□□□ -2.5
SNX3O60493 RNA5SP285-201ENST00000516619 119 ntBASIC-0.54□□□□□ -2.5
SNX3O60493 SNORD114-11-201ENST00000363738 75 ntBASIC-0.55□□□□□ -2.5
SNX3O60493 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.55□□□□□ -2.5
SNX3O60493 MTATP6P29-201ENST00000415057 132 ntBASIC-0.55□□□□□ -2.5
SNX3O60493 RNU6-162P-201ENST00000516228 103 ntBASIC-0.55□□□□□ -2.5
SNX3O60493 MIR548AZ-201ENST00000616567 95 ntBASIC-0.55□□□□□ -2.5
SNX3O60493 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.56□□□□□ -2.5
SNX3O60493 RNA5SP66-201ENST00000517178 101 ntBASIC-0.56□□□□□ -2.5
SNX3O60493 U7.3-201ENST00000616123 62 ntBASIC-0.56□□□□□ -2.5
SNX3O60493 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.56□□□□□ -2.5
SNX3O60493 MIR6759-201ENST00000638110 65 ntBASIC-0.56□□□□□ -2.5
SNX3O60493 RNU6-766P-201ENST00000362478 107 ntBASIC-0.57□□□□□ -2.5
SNX3O60493 SNORD14C-201ENST00000365382 88 ntBASIC-0.57□□□□□ -2.5
SNX3O60493 SNORA32.3-201ENST00000384772 121 ntBASIC-0.57□□□□□ -2.5
SNX3O60493 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.57□□□□□ -2.5
SNX3O60493 uc_338.36-201ENST00000622331 158 ntBASIC-0.57□□□□□ -2.5
SNX3O60493 SNORD75.2-201ENST00000408784 58 ntBASIC-0.58□□□□□ -2.5
SNX3O60493 snoU13.13-201ENST00000458842 104 ntBASIC-0.58□□□□□ -2.5
SNX3O60493 RNU7-55P-201ENST00000459426 62 ntBASIC-0.58□□□□□ -2.5
SNX3O60493 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.59□□□□□ -2.5
SNX3O60493 RNU6-901P-201ENST00000384593 106 ntBASIC-0.59□□□□□ -2.5
SNX3O60493 SNORD56B-201ENST00000384713 71 ntBASIC-0.59□□□□□ -2.5
SNX3O60493 RNU2-51P-201ENST00000410708 197 ntBASIC-0.59□□□□□ -2.5
SNX3O60493 AL445193.1-201ENST00000441183 141 ntBASIC-0.59□□□□□ -2.5
SNX3O60493 RNU7-24P-201ENST00000458867 62 ntBASIC-0.59□□□□□ -2.5
SNX3O60493 SNORA40.17-201ENST00000517256 115 ntBASIC-0.59□□□□□ -2.5
SNX3O60493 RNU6-502P-201ENST00000362419 108 ntBASIC-0.6□□□□□ -2.51
SNX3O60493 RNU6-990P-201ENST00000364385 104 ntBASIC-0.6□□□□□ -2.51
SNX3O60493 RPS29P8-201ENST00000445109 171 ntBASIC-0.6□□□□□ -2.51
SNX3O60493 SNORA63.6-201ENST00000364921 119 ntBASIC-0.61□□□□□ -2.51
SNX3O60493 RNU6-284P-201ENST00000411105 106 ntBASIC-0.61□□□□□ -2.51
SNX3O60493 MIR4796-201ENST00000580742 81 ntBASIC-0.61□□□□□ -2.51
SNX3O60493 AP001180.6-201ENST00000584918 159 ntBASIC-0.61□□□□□ -2.51
SNX3O60493 RNU5F-1-201ENST00000362507 117 ntBASIC-0.62□□□□□ -2.51
SNX3O60493 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.62□□□□□ -2.51
SNX3O60493 SNORD113-1-201ENST00000365321 69 ntBASIC-0.62□□□□□ -2.51
SNX3O60493 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.62□□□□□ -2.51
SNX3O60493 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.62□□□□□ -2.51
SNX3O60493 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
SNX3O60493 snoU13.17-201ENST00000458802 104 ntBASIC-0.62□□□□□ -2.51
SNX3O60493 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.62□□□□□ -2.51
SNX3O60493 MIR4802-201ENST00000581881 80 ntBASIC-0.62□□□□□ -2.51
SNX3O60493 AC093726.3-201ENST00000637588 150 ntBASIC-0.62□□□□□ -2.51
SNX3O60493 RNU6-382P-201ENST00000365181 106 ntBASIC-0.63□□□□□ -2.51
SNX3O60493 AL603908.1-201ENST00000406098 201 ntBASIC-0.63□□□□□ -2.51
SNX3O60493 MIR1236-201ENST00000408340 102 ntBASIC-0.63□□□□□ -2.51
SNX3O60493 SNORD75.1-201ENST00000408373 60 ntBASIC-0.63□□□□□ -2.51
SNX3O60493 MTATP8P2-201ENST00000435212 202 ntBASIC-0.63□□□□□ -2.51
SNX3O60493 AC006254.2-201ENST00000603259 279 ntBASIC-0.63□□□□□ -2.51
SNX3O60493 RNU6-824P-201ENST00000363724 104 ntBASIC-0.64□□□□□ -2.51
SNX3O60493 AL031737.1-201ENST00000450125 223 ntBASIC-0.64□□□□□ -2.51
SNX3O60493 AC114755.3-201ENST00000481111 251 ntBASIC-0.64□□□□□ -2.51
SNX3O60493 MIR4432-201ENST00000581823 84 ntBASIC-0.64□□□□□ -2.51
SNX3O60493 MIR4280-201ENST00000582178 76 ntBASIC-0.64□□□□□ -2.51
SNX3O60493 MIR450A1-201ENST00000362262 91 ntBASIC-0.65□□□□□ -2.51
SNX3O60493 MIR101-1-201ENST00000362265 75 ntBASIC-0.65□□□□□ -2.51
SNX3O60493 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.65□□□□□ -2.51
SNX3O60493 MIR7-2-201ENST00000384970 110 ntBASIC-0.65□□□□□ -2.51
SNX3O60493 RNY4P18-201ENST00000391107 89 ntBASIC-0.65□□□□□ -2.51
SNX3O60493 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.65□□□□□ -2.51
SNX3O60493 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.65□□□□□ -2.51
SNX3O60493 RNU6-158P-201ENST00000517104 100 ntBASIC-0.65□□□□□ -2.51
SNX3O60493 MIR5589-201ENST00000579442 60 ntBASIC-0.65□□□□□ -2.51
SNX3O60493 MIR6773-201ENST00000612812 74 ntBASIC-0.65□□□□□ -2.51
SNX3O60493 MIR4773-1-201ENST00000637203 78 ntBASIC-0.65□□□□□ -2.51
SNX3O60493 RNU6-973P-201ENST00000364690 107 ntBASIC-0.66□□□□□ -2.52
SNX3O60493 AL606753.1-201ENST00000427435 87 ntBASIC-0.66□□□□□ -2.52
SNX3O60493 AL391099.1-201ENST00000624635 187 ntBASIC-0.66□□□□□ -2.52
SNX3O60493 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.67□□□□□ -2.52
SNX3O60493 AC021146.9-201ENST00000512503 156 ntBASIC-0.67□□□□□ -2.52
SNX3O60493 RNU7-153P-201ENST00000516455 62 ntBASIC-0.67□□□□□ -2.52
SNX3O60493 MIR4436A-201ENST00000585278 85 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 204.2 ms