Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.73□□□□□ -2.85
CCDC42Q96M95 MIR507-201ENST00000385234 94 ntBASIC-2.73□□□□□ -2.85
CCDC42Q96M95 AC025521.1-201ENST00000621624 286 ntBASIC-2.73□□□□□ -2.85
CCDC42Q96M95 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.74□□□□□ -2.85
CCDC42Q96M95 RNU6-260P-201ENST00000384092 107 ntBASIC-2.74□□□□□ -2.85
CCDC42Q96M95 SNORD116-4-201ENST00000384733 96 ntBASIC-2.74□□□□□ -2.85
CCDC42Q96M95 MIR548D2-201ENST00000384955 97 ntBASIC-2.74□□□□□ -2.85
CCDC42Q96M95 MIR548U-201ENST00000390728 81 ntBASIC-2.74□□□□□ -2.85
CCDC42Q96M95 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.74□□□□□ -2.85
CCDC42Q96M95 snoU13.17-201ENST00000458802 104 ntBASIC-2.74□□□□□ -2.85
CCDC42Q96M95 RNU7-85P-201ENST00000458851 63 ntBASIC-2.74□□□□□ -2.85
CCDC42Q96M95 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.74□□□□□ -2.85
CCDC42Q96M95 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.74□□□□□ -2.85
CCDC42Q96M95 CYP3A54P-201ENST00000566950 75 ntBASIC-2.74□□□□□ -2.85
CCDC42Q96M95 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.75□□□□□ -2.85
CCDC42Q96M95 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.75□□□□□ -2.85
CCDC42Q96M95 RNY3P1-201ENST00000365085 102 ntBASIC-2.75□□□□□ -2.85
CCDC42Q96M95 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.75□□□□□ -2.85
CCDC42Q96M95 AL627230.5-201ENST00000619807 58 ntBASIC-2.75□□□□□ -2.85
CCDC42Q96M95 MIR369-201ENST00000362155 70 ntBASIC-2.77□□□□□ -2.85
CCDC42Q96M95 RNY4P28-201ENST00000365281 93 ntBASIC-2.77□□□□□ -2.85
CCDC42Q96M95 RNU6-80P-201ENST00000384195 107 ntBASIC-2.77□□□□□ -2.85
CCDC42Q96M95 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.77□□□□□ -2.85
CCDC42Q96M95 RNU7-154P-201ENST00000516194 62 ntBASIC-2.77□□□□□ -2.85
CCDC42Q96M95 RNU6-412P-201ENST00000516434 106 ntBASIC-2.77□□□□□ -2.85
CCDC42Q96M95 AC139792.2-201ENST00000624218 587 ntBASIC-2.77□□□□□ -2.85
CCDC42Q96M95 SNORD42.2-201ENST00000365570 69 ntBASIC-2.78□□□□□ -2.85
CCDC42Q96M95 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.78□□□□□ -2.85
CCDC42Q96M95 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.78□□□□□ -2.85
CCDC42Q96M95 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.78□□□□□ -2.85
CCDC42Q96M95 AL078595.1-201ENST00000404458 226 ntBASIC-2.78□□□□□ -2.85
CCDC42Q96M95 AC006254.2-201ENST00000603259 279 ntBASIC-2.78□□□□□ -2.85
CCDC42Q96M95 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.78□□□□□ -2.85
CCDC42Q96M95 SNORA2.1-201ENST00000363089 137 ntBASIC-2.79□□□□□ -2.86
CCDC42Q96M95 RNY1P11-201ENST00000363759 113 ntBASIC-2.79□□□□□ -2.86
CCDC42Q96M95 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.79□□□□□ -2.86
CCDC42Q96M95 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.79□□□□□ -2.86
CCDC42Q96M95 MIR3064-201ENST00000581130 66 ntBASIC-2.79□□□□□ -2.86
CCDC42Q96M95 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.8□□□□□ -2.86
CCDC42Q96M95 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.8□□□□□ -2.86
CCDC42Q96M95 MT-TW-201ENST00000387382 68 ntBASIC-2.8□□□□□ -2.86
CCDC42Q96M95 MIR1468-201ENST00000410600 86 ntBASIC-2.8□□□□□ -2.86
CCDC42Q96M95 RNU6-983P-201ENST00000516004 103 ntBASIC-2.8□□□□□ -2.86
CCDC42Q96M95 RNU6-988P-201ENST00000519081 107 ntBASIC-2.8□□□□□ -2.86
CCDC42Q96M95 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.81□□□□□ -2.86
CCDC42Q96M95 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.81□□□□□ -2.86
CCDC42Q96M95 Y_RNA.352-201ENST00000365439 102 ntBASIC-2.81□□□□□ -2.86
CCDC42Q96M95 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.81□□□□□ -2.86
CCDC42Q96M95 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.81□□□□□ -2.86
CCDC42Q96M95 RNA5SP147-201ENST00000516493 109 ntBASIC-2.81□□□□□ -2.86
CCDC42Q96M95 MIR4490-201ENST00000582647 84 ntBASIC-2.81□□□□□ -2.86
CCDC42Q96M95 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.82□□□□□ -2.86
CCDC42Q96M95 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.82□□□□□ -2.86
CCDC42Q96M95 AC104996.3-201ENST00000590718 94 ntBASIC-2.82□□□□□ -2.86
CCDC42Q96M95 Y_RNA.65-201ENST00000362846 100 ntBASIC-2.83□□□□□ -2.86
CCDC42Q96M95 RNU6-382P-201ENST00000365181 106 ntBASIC-2.83□□□□□ -2.86
CCDC42Q96M95 RNU6-540P-201ENST00000384622 101 ntBASIC-2.83□□□□□ -2.86
CCDC42Q96M95 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.84□□□□□ -2.86
CCDC42Q96M95 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.84□□□□□ -2.86
CCDC42Q96M95 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.84□□□□□ -2.86
CCDC42Q96M95 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.84□□□□□ -2.86
CCDC42Q96M95 RNA5SP136-201ENST00000410906 107 ntBASIC-2.84□□□□□ -2.86
CCDC42Q96M95 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.84□□□□□ -2.86
CCDC42Q96M95 AL513043.2-201ENST00000573941 143 ntBASIC-2.84□□□□□ -2.86
CCDC42Q96M95 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.84□□□□□ -2.86
CCDC42Q96M95 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.84□□□□□ -2.86
CCDC42Q96M95 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.85□□□□□ -2.87
CCDC42Q96M95 RNU6-732P-201ENST00000516033 103 ntBASIC-2.85□□□□□ -2.87
CCDC42Q96M95 RNA5SP86-201ENST00000390869 98 ntBASIC-2.86□□□□□ -2.87
CCDC42Q96M95 MIR548H1-201ENST00000408610 102 ntBASIC-2.86□□□□□ -2.87
CCDC42Q96M95 RNA5SP272-201ENST00000516095 111 ntBASIC-2.86□□□□□ -2.87
CCDC42Q96M95 RNU6-62P-201ENST00000516526 102 ntBASIC-2.86□□□□□ -2.87
CCDC42Q96M95 RNU6-312P-201ENST00000364629 107 ntBASIC-2.87□□□□□ -2.87
CCDC42Q96M95 MIR3121-201ENST00000579680 77 ntBASIC-2.87□□□□□ -2.87
CCDC42Q96M95 MIR3657-201ENST00000584818 117 ntBASIC-2.87□□□□□ -2.87
CCDC42Q96M95 MIR6509-201ENST00000614603 85 ntBASIC-2.87□□□□□ -2.87
CCDC42Q96M95 MIR5683-201ENST00000636514 76 ntBASIC-2.87□□□□□ -2.87
CCDC42Q96M95 RNY4P6-201ENST00000363667 96 ntBASIC-2.88□□□□□ -2.87
CCDC42Q96M95 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.88□□□□□ -2.87
CCDC42Q96M95 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.88□□□□□ -2.87
CCDC42Q96M95 MIR519A2-201ENST00000384990 87 ntBASIC-2.88□□□□□ -2.87
CCDC42Q96M95 SNORD37.2-201ENST00000391075 66 ntBASIC-2.88□□□□□ -2.87
CCDC42Q96M95 MIR548P-201ENST00000408336 84 ntBASIC-2.88□□□□□ -2.87
CCDC42Q96M95 SNORD18.1-201ENST00000363807 70 ntBASIC-2.89□□□□□ -2.87
CCDC42Q96M95 RNU6-713P-201ENST00000384761 107 ntBASIC-2.89□□□□□ -2.87
CCDC42Q96M95 MIR521-2-201ENST00000384818 87 ntBASIC-2.9□□□□□ -2.87
CCDC42Q96M95 MIR203A-201ENST00000384836 110 ntBASIC-2.9□□□□□ -2.87
CCDC42Q96M95 RNU6-816P-201ENST00000390914 107 ntBASIC-2.9□□□□□ -2.87
CCDC42Q96M95 RNU6-1268P-201ENST00000391214 107 ntBASIC-2.9□□□□□ -2.87
CCDC42Q96M95 RNU6-1239P-201ENST00000391310 107 ntBASIC-2.9□□□□□ -2.87
CCDC42Q96M95 SNORD127-201ENST00000458892 86 ntBASIC-2.9□□□□□ -2.87
CCDC42Q96M95 U6atac.1-201ENST00000616025 117 ntBASIC-2.9□□□□□ -2.87
CCDC42Q96M95 U6.104-201ENST00000637979 90 ntBASIC-2.9□□□□□ -2.87
CCDC42Q96M95 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.91□□□□□ -2.88
CCDC42Q96M95 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.91□□□□□ -2.88
CCDC42Q96M95 RNU6-168P-201ENST00000516189 101 ntBASIC-2.91□□□□□ -2.88
CCDC42Q96M95 AP002795.1-201ENST00000534879 84 ntBASIC-2.91□□□□□ -2.88
CCDC42Q96M95 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.92□□□□□ -2.88
CCDC42Q96M95 MIR1302-6-201ENST00000408466 90 ntBASIC-2.92□□□□□ -2.88
CCDC42Q96M95 AC130289.1-201ENST00000577321 73 ntBASIC-2.92□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 204.2 ms