Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 AC092794.1-201ENST00000612734 582 ntBASIC-4.13□□□□□ -3.07
LINC00643Q86TS7 U6.58-201ENST00000613107 107 ntBASIC-4.13□□□□□ -3.07
LINC00643Q86TS7 RNU6-1262P-201ENST00000516217 96 ntBASIC-4.14□□□□□ -3.07
LINC00643Q86TS7 RNU6-1314P-201ENST00000517139 104 ntBASIC-4.14□□□□□ -3.07
LINC00643Q86TS7 RNU6-232P-201ENST00000517144 64 ntBASIC-4.14□□□□□ -3.07
LINC00643Q86TS7 MIR3064-201ENST00000581130 66 ntBASIC-4.14□□□□□ -3.07
LINC00643Q86TS7 DLEU2_2.2-201ENST00000615474 90 ntBASIC-4.14□□□□□ -3.07
LINC00643Q86TS7 Y_RNA.153-201ENST00000363615 91 ntBASIC-4.15□□□□□ -3.07
LINC00643Q86TS7 SNORD50.2-201ENST00000365465 70 ntBASIC-4.15□□□□□ -3.07
LINC00643Q86TS7 RNU6-651P-201ENST00000411040 105 ntBASIC-4.15□□□□□ -3.07
LINC00643Q86TS7 RNU7-85P-201ENST00000458851 63 ntBASIC-4.15□□□□□ -3.07
LINC00643Q86TS7 RNU6-1281P-201ENST00000516223 105 ntBASIC-4.15□□□□□ -3.07
LINC00643Q86TS7 Y_RNA.482-201ENST00000384377 111 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 SNORA26.8-201ENST00000391306 124 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 RNU6-908P-201ENST00000410160 94 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 MTND4LP30-201ENST00000454092 297 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 RNY4P20-201ENST00000516678 93 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 MIR1255B1-201ENST00000636325 63 ntBASIC-4.16□□□□□ -3.08
LINC00643Q86TS7 RNU6-451P-201ENST00000362921 107 ntBASIC-4.17□□□□□ -3.08
LINC00643Q86TS7 SNORD113-8-201ENST00000363497 74 ntBASIC-4.17□□□□□ -3.08
LINC00643Q86TS7 RNY4P28-201ENST00000365281 93 ntBASIC-4.17□□□□□ -3.08
LINC00643Q86TS7 RNU6-211P-201ENST00000384047 107 ntBASIC-4.17□□□□□ -3.08
LINC00643Q86TS7 Y_RNA.53-201ENST00000362765 102 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 MIR548F5-201ENST00000408421 86 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 RNU7-125P-201ENST00000458760 62 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 U8.20-201ENST00000459445 131 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 RNU6-807P-201ENST00000516805 107 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 SCARNA24.2-201ENST00000516968 130 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 MIR3915-201ENST00000578518 97 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 AC104996.3-201ENST00000590718 94 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 AC025521.1-201ENST00000621624 286 ntBASIC-4.18□□□□□ -3.08
LINC00643Q86TS7 RNU6-101P-201ENST00000410323 104 ntBASIC-4.19□□□□□ -3.08
LINC00643Q86TS7 MTND3P2-201ENST00000438452 342 ntBASIC-4.19□□□□□ -3.08
LINC00643Q86TS7 AC097484.2-201ENST00000509147 251 ntBASIC-4.19□□□□□ -3.08
LINC00643Q86TS7 U6.106-201ENST00000636360 105 ntBASIC-4.19□□□□□ -3.08
LINC00643Q86TS7 RNU4-90P-201ENST00000362773 141 ntBASIC-4.2□□□□□ -3.08
LINC00643Q86TS7 RNU6-832P-201ENST00000363319 107 ntBASIC-4.2□□□□□ -3.08
LINC00643Q86TS7 RNU6-1111P-201ENST00000391118 107 ntBASIC-4.2□□□□□ -3.08
LINC00643Q86TS7 RNU6-311P-201ENST00000516224 102 ntBASIC-4.2□□□□□ -3.08
LINC00643Q86TS7 SNORA25.1-201ENST00000362326 128 ntBASIC-4.21□□□□□ -3.08
LINC00643Q86TS7 RNU6-824P-201ENST00000363724 104 ntBASIC-4.21□□□□□ -3.08
LINC00643Q86TS7 MIR122-201ENST00000385044 85 ntBASIC-4.21□□□□□ -3.08
LINC00643Q86TS7 RNU6-62P-201ENST00000516526 102 ntBASIC-4.21□□□□□ -3.08
LINC00643Q86TS7 RPS29P30-201ENST00000600975 111 ntBASIC-4.21□□□□□ -3.08
LINC00643Q86TS7 Y_RNA.144-201ENST00000363521 113 ntBASIC-4.22□□□□□ -3.08
LINC00643Q86TS7 RNY3P3-201ENST00000363816 102 ntBASIC-4.22□□□□□ -3.08
LINC00643Q86TS7 RNU6-1148P-201ENST00000410992 104 ntBASIC-4.22□□□□□ -3.08
LINC00643Q86TS7 AL121914.1-201ENST00000450188 156 ntBASIC-4.22□□□□□ -3.08
LINC00643Q86TS7 RNU6-230P-201ENST00000362457 104 ntBASIC-4.23□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.39-201ENST00000362620 98 ntBASIC-4.23□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.228-201ENST00000364346 98 ntBASIC-4.23□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.602-201ENST00000410535 92 ntBASIC-4.23□□□□□ -3.09
LINC00643Q86TS7 RBMX2P4-201ENST00000441256 376 ntBASIC-4.23□□□□□ -3.09
LINC00643Q86TS7 RNA5SP93-201ENST00000362525 114 ntBASIC-4.24□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.394-201ENST00000383942 103 ntBASIC-4.24□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.513-201ENST00000384522 100 ntBASIC-4.24□□□□□ -3.09
LINC00643Q86TS7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-4.24□□□□□ -3.09
LINC00643Q86TS7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-4.24□□□□□ -3.09
LINC00643Q86TS7 MIR6863-201ENST00000636112 90 ntBASIC-4.24□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.82-201ENST00000363000 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.92-201ENST00000363043 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 RNU6-682P-201ENST00000363843 106 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.235-201ENST00000364412 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.306-201ENST00000365015 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.308-201ENST00000365043 101 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.312-201ENST00000365089 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.322-201ENST00000365151 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 MTATP6P29-201ENST00000415057 132 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.650-201ENST00000459002 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 RN7SKP298-201ENST00000515950 94 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 RNU6-1018P-201ENST00000516577 106 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.777-201ENST00000516982 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.771-201ENST00000598668 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.789-201ENST00000622480 102 ntBASIC-4.25□□□□□ -3.09
LINC00643Q86TS7 MIR429-201ENST00000362106 83 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.527-201ENST00000384573 102 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.647-201ENST00000459194 112 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.640-201ENST00000459296 112 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 AC093424.1-201ENST00000604999 338 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.803-201ENST00000614432 112 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.815-201ENST00000616655 112 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 U2.7-201ENST00000619197 100 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.795-201ENST00000619475 112 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 Y_RNA.827-201ENST00000638104 112 ntBASIC-4.26□□□□□ -3.09
LINC00643Q86TS7 RNU1-115P-201ENST00000365329 160 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 RNU6-381P-201ENST00000391259 108 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 RNU6-373P-201ENST00000411247 98 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 AC099799.1-201ENST00000439809 192 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 MIR3163-201ENST00000581592 73 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 AC013734.1-201ENST00000619329 111 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 U6.97-201ENST00000636904 101 ntBASIC-4.27□□□□□ -3.09
LINC00643Q86TS7 RNU6-483P-201ENST00000384088 108 ntBASIC-4.28□□□□□ -3.09
LINC00643Q86TS7 MIR759-201ENST00000390224 91 ntBASIC-4.28□□□□□ -3.09
LINC00643Q86TS7 SNORD90-201ENST00000391145 111 ntBASIC-4.28□□□□□ -3.09
LINC00643Q86TS7 DLEU2_1.2-201ENST00000614667 120 ntBASIC-4.28□□□□□ -3.09
LINC00643Q86TS7 MIR3170-201ENST00000582699 77 ntBASIC-4.29□□□□□ -3.1
LINC00643Q86TS7 AC037487.3-201ENST00000606668 112 ntBASIC-4.29□□□□□ -3.1
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms