Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNU1-141P-201ENST00000364623 158 ntBASIC-0.39□□□□□ -2.47
SIX3O95343 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.39□□□□□ -2.47
SIX3O95343 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.39□□□□□ -2.47
SIX3O95343 RNA5SP180-201ENST00000516181 101 ntBASIC-0.39□□□□□ -2.47
SIX3O95343 AL353621.2-201ENST00000605340 133 ntBASIC-0.39□□□□□ -2.47
SIX3O95343 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.4□□□□□ -2.47
SIX3O95343 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.4□□□□□ -2.47
SIX3O95343 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.41□□□□□ -2.48
SIX3O95343 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.41□□□□□ -2.48
SIX3O95343 MIR4460-201ENST00000577862 86 ntBASIC-0.41□□□□□ -2.48
SIX3O95343 AC004792.1-201ENST00000614523 137 ntBASIC-0.41□□□□□ -2.48
SIX3O95343 uc_338.10-201ENST00000621872 182 ntBASIC-0.41□□□□□ -2.48
SIX3O95343 MIR1255B1-201ENST00000636325 63 ntBASIC-0.41□□□□□ -2.48
SIX3O95343 U8.6-201ENST00000364939 135 ntBASIC-0.42□□□□□ -2.48
SIX3O95343 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.42□□□□□ -2.48
SIX3O95343 MIR617-201ENST00000385030 97 ntBASIC-0.42□□□□□ -2.48
SIX3O95343 RNU7-197P-201ENST00000458836 62 ntBASIC-0.42□□□□□ -2.48
SIX3O95343 MIR548X2-201ENST00000579776 100 ntBASIC-0.42□□□□□ -2.48
SIX3O95343 YWHAEP2-201ENST00000580066 112 ntBASIC-0.42□□□□□ -2.48
SIX3O95343 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.42□□□□□ -2.48
SIX3O95343 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.43□□□□□ -2.48
SIX3O95343 MT-TI-201ENST00000387365 69 ntBASIC-0.43□□□□□ -2.48
SIX3O95343 SNORD126-201ENST00000459475 77 ntBASIC-0.43□□□□□ -2.48
SIX3O95343 FTX_2.1-201ENST00000618816 94 ntBASIC-0.43□□□□□ -2.48
SIX3O95343 AL162726.3-218ENST00000636401 95 ntBASIC-0.43□□□□□ -2.48
SIX3O95343 MIR148A-201ENST00000362215 68 ntBASIC-0.44□□□□□ -2.48
SIX3O95343 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.44□□□□□ -2.48
SIX3O95343 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.44□□□□□ -2.48
SIX3O95343 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.44□□□□□ -2.48
SIX3O95343 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.44□□□□□ -2.48
SIX3O95343 RNU6-182P-201ENST00000516970 105 ntBASIC-0.44□□□□□ -2.48
SIX3O95343 RNU6-90P-201ENST00000606352 106 ntBASIC-0.44□□□□□ -2.48
SIX3O95343 AC069503.3-201ENST00000618674 145 ntBASIC-0.44□□□□□ -2.48
SIX3O95343 MIR548D2-201ENST00000384955 97 ntBASIC-0.45□□□□□ -2.48
SIX3O95343 MIR519E-201ENST00000385075 84 ntBASIC-0.45□□□□□ -2.48
SIX3O95343 MT-TG-201ENST00000387429 68 ntBASIC-0.45□□□□□ -2.48
SIX3O95343 MIR876-201ENST00000401147 81 ntBASIC-0.45□□□□□ -2.48
SIX3O95343 RNU7-188P-201ENST00000517063 64 ntBASIC-0.45□□□□□ -2.48
SIX3O95343 RNA5SP192-201ENST00000364404 120 ntBASIC-0.46□□□□□ -2.48
SIX3O95343 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.46□□□□□ -2.48
SIX3O95343 RNU6-409P-201ENST00000384114 104 ntBASIC-0.46□□□□□ -2.48
SIX3O95343 SNORA51.5-201ENST00000384126 131 ntBASIC-0.46□□□□□ -2.48
SIX3O95343 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.46□□□□□ -2.48
SIX3O95343 AL161932.1-201ENST00000437408 146 ntBASIC-0.46□□□□□ -2.48
SIX3O95343 AC021146.9-201ENST00000512503 156 ntBASIC-0.46□□□□□ -2.48
SIX3O95343 MIR3165-201ENST00000579874 75 ntBASIC-0.46□□□□□ -2.48
SIX3O95343 TRDV1-202ENST00000621643 102 ntBASIC-0.46□□□□□ -2.48
SIX3O95343 AP001340.1-201ENST00000624405 217 ntBASIC-0.46□□□□□ -2.48
SIX3O95343 MIR4788-201ENST00000639104 80 ntBASIC-0.46□□□□□ -2.48
SIX3O95343 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.47□□□□□ -2.48
SIX3O95343 SNORD38.1-201ENST00000363863 68 ntBASIC-0.47□□□□□ -2.48
SIX3O95343 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.47□□□□□ -2.48
SIX3O95343 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.47□□□□□ -2.48
SIX3O95343 MIR2113-201ENST00000459007 91 ntBASIC-0.47□□□□□ -2.48
SIX3O95343 MIR4263-201ENST00000584745 83 ntBASIC-0.47□□□□□ -2.48
SIX3O95343 U7.2-201ENST00000607576 63 ntBASIC-0.47□□□□□ -2.48
SIX3O95343 RNY1P7-201ENST00000384743 110 ntBASIC-0.48□□□□□ -2.49
SIX3O95343 MIR181B2-201ENST00000385004 89 ntBASIC-0.48□□□□□ -2.49
SIX3O95343 RNA5SP300-201ENST00000391197 107 ntBASIC-0.48□□□□□ -2.49
SIX3O95343 MIR548G-201ENST00000408442 89 ntBASIC-0.48□□□□□ -2.49
SIX3O95343 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.48□□□□□ -2.49
SIX3O95343 RNU6-804P-201ENST00000384286 107 ntBASIC-0.49□□□□□ -2.49
SIX3O95343 RNU6-480P-201ENST00000384332 107 ntBASIC-0.49□□□□□ -2.49
SIX3O95343 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.49□□□□□ -2.49
SIX3O95343 SCARNA17-201ENST00000516183 144 ntBASIC-0.49□□□□□ -2.49
SIX3O95343 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.49□□□□□ -2.49
SIX3O95343 MIR3666-201ENST00000607845 111 ntBASIC-0.49□□□□□ -2.49
SIX3O95343 MIR6507-201ENST00000613630 70 ntBASIC-0.49□□□□□ -2.49
SIX3O95343 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.5□□□□□ -2.49
SIX3O95343 RNU6-363P-201ENST00000362895 105 ntBASIC-0.5□□□□□ -2.49
SIX3O95343 SNORD114-29-201ENST00000364819 70 ntBASIC-0.5□□□□□ -2.49
SIX3O95343 RNU6-119P-201ENST00000364882 107 ntBASIC-0.5□□□□□ -2.49
SIX3O95343 AL158147.1-201ENST00000443970 75 ntBASIC-0.5□□□□□ -2.49
SIX3O95343 RNY4-201ENST00000516507 96 ntBASIC-0.5□□□□□ -2.49
SIX3O95343 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.5□□□□□ -2.49
SIX3O95343 MIR3115-201ENST00000577915 68 ntBASIC-0.5□□□□□ -2.49
SIX3O95343 MIR548AG2-201ENST00000581228 64 ntBASIC-0.5□□□□□ -2.49
SIX3O95343 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.5□□□□□ -2.49
SIX3O95343 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.5□□□□□ -2.49
SIX3O95343 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.51□□□□□ -2.49
SIX3O95343 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.51□□□□□ -2.49
SIX3O95343 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.51□□□□□ -2.49
SIX3O95343 MIR196A2-201ENST00000385189 110 ntBASIC-0.51□□□□□ -2.49
SIX3O95343 RNU6-466P-201ENST00000391224 103 ntBASIC-0.51□□□□□ -2.49
SIX3O95343 RNU6-394P-201ENST00000410735 107 ntBASIC-0.51□□□□□ -2.49
SIX3O95343 AC244250.2-201ENST00000418731 148 ntBASIC-0.51□□□□□ -2.49
SIX3O95343 MIR3144-201ENST00000579460 79 ntBASIC-0.51□□□□□ -2.49
SIX3O95343 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.52□□□□□ -2.49
SIX3O95343 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.52□□□□□ -2.49
SIX3O95343 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.52□□□□□ -2.49
SIX3O95343 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.52□□□□□ -2.49
SIX3O95343 MIR548AE1-201ENST00000583292 70 ntBASIC-0.52□□□□□ -2.49
SIX3O95343 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.53□□□□□ -2.49
SIX3O95343 RNU6-154P-201ENST00000384306 106 ntBASIC-0.53□□□□□ -2.49
SIX3O95343 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.53□□□□□ -2.49
SIX3O95343 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.53□□□□□ -2.49
SIX3O95343 AC025166.1-201ENST00000612411 163 ntBASIC-0.53□□□□□ -2.49
SIX3O95343 SNORD36A-201ENST00000362874 73 ntBASIC-0.54□□□□□ -2.5
SIX3O95343 RNU6-781P-201ENST00000516377 101 ntBASIC-0.54□□□□□ -2.5
SIX3O95343 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms