Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU7-195P-201ENST00000458793 62 ntBASIC-0.16□□□□□ -2.43
SHROOM4Q9ULL8 MIR3144-201ENST00000579460 79 ntBASIC-0.16□□□□□ -2.43
SHROOM4Q9ULL8 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.16□□□□□ -2.44
SHROOM4Q9ULL8 snosnR66.1-201ENST00000391095 99 ntBASIC-0.16□□□□□ -2.44
SHROOM4Q9ULL8 MIR1263-201ENST00000408324 86 ntBASIC-0.16□□□□□ -2.44
SHROOM4Q9ULL8 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.17□□□□□ -2.44
SHROOM4Q9ULL8 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.17□□□□□ -2.44
SHROOM4Q9ULL8 RNU7-13P-201ENST00000516413 62 ntBASIC-0.18□□□□□ -2.44
SHROOM4Q9ULL8 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.18□□□□□ -2.44
SHROOM4Q9ULL8 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.18□□□□□ -2.44
SHROOM4Q9ULL8 RNU6-929P-201ENST00000384429 107 ntBASIC-0.19□□□□□ -2.44
SHROOM4Q9ULL8 RNU6-850P-201ENST00000516934 103 ntBASIC-0.19□□□□□ -2.44
SHROOM4Q9ULL8 MIR548AD-201ENST00000584780 82 ntBASIC-0.19□□□□□ -2.44
SHROOM4Q9ULL8 uc_338.28-201ENST00000612082 187 ntBASIC-0.19□□□□□ -2.44
SHROOM4Q9ULL8 SNORA70.25-201ENST00000612741 95 ntBASIC-0.19□□□□□ -2.44
SHROOM4Q9ULL8 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.2□□□□□ -2.44
SHROOM4Q9ULL8 RNU6-756P-201ENST00000383997 107 ntBASIC-0.2□□□□□ -2.44
SHROOM4Q9ULL8 SNORD110-201ENST00000408189 75 ntBASIC-0.2□□□□□ -2.44
SHROOM4Q9ULL8 MIR548H2-201ENST00000408874 88 ntBASIC-0.2□□□□□ -2.44
SHROOM4Q9ULL8 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.2□□□□□ -2.44
SHROOM4Q9ULL8 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.21□□□□□ -2.44
SHROOM4Q9ULL8 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.21□□□□□ -2.44
SHROOM4Q9ULL8 MT-TI-201ENST00000387365 69 ntBASIC-0.21□□□□□ -2.44
SHROOM4Q9ULL8 RNU7-106P-201ENST00000459514 67 ntBASIC-0.21□□□□□ -2.44
SHROOM4Q9ULL8 MIR3920-201ENST00000581751 86 ntBASIC-0.21□□□□□ -2.44
SHROOM4Q9ULL8 AL512310.12-203ENST00000640543 90 ntBASIC-0.21□□□□□ -2.44
SHROOM4Q9ULL8 RNU6-804P-201ENST00000384286 107 ntBASIC-0.22□□□□□ -2.44
SHROOM4Q9ULL8 MIR34C-201ENST00000384831 77 ntBASIC-0.22□□□□□ -2.44
SHROOM4Q9ULL8 MIR8064-201ENST00000612863 90 ntBASIC-0.22□□□□□ -2.44
SHROOM4Q9ULL8 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.22□□□□□ -2.45
SHROOM4Q9ULL8 RNU6-524P-201ENST00000384270 107 ntBASIC-0.22□□□□□ -2.45
SHROOM4Q9ULL8 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.23□□□□□ -2.45
SHROOM4Q9ULL8 MIR601-201ENST00000385256 79 ntBASIC-0.23□□□□□ -2.45
SHROOM4Q9ULL8 MIR501-201ENST00000390204 84 ntBASIC-0.23□□□□□ -2.45
SHROOM4Q9ULL8 U7.2-201ENST00000607576 63 ntBASIC-0.23□□□□□ -2.45
SHROOM4Q9ULL8 SNORD114-12-201ENST00000365400 75 ntBASIC-0.24□□□□□ -2.45
SHROOM4Q9ULL8 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.24□□□□□ -2.45
SHROOM4Q9ULL8 AC006210.1-201ENST00000424882 111 ntBASIC-0.24□□□□□ -2.45
SHROOM4Q9ULL8 AL158147.1-201ENST00000443970 75 ntBASIC-0.24□□□□□ -2.45
SHROOM4Q9ULL8 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.25□□□□□ -2.45
SHROOM4Q9ULL8 RNU4-63P-201ENST00000411313 118 ntBASIC-0.25□□□□□ -2.45
SHROOM4Q9ULL8 RNY4P6-201ENST00000363667 96 ntBASIC-0.26□□□□□ -2.45
SHROOM4Q9ULL8 AL670379.3-201ENST00000605040 251 ntBASIC-0.26□□□□□ -2.45
SHROOM4Q9ULL8 MIR106A-201ENST00000384870 81 ntBASIC-0.27□□□□□ -2.45
SHROOM4Q9ULL8 MIR516A2-201ENST00000384888 90 ntBASIC-0.27□□□□□ -2.45
SHROOM4Q9ULL8 MIR516A1-201ENST00000385033 90 ntBASIC-0.27□□□□□ -2.45
SHROOM4Q9ULL8 RNU7-159P-201ENST00000459284 62 ntBASIC-0.27□□□□□ -2.45
SHROOM4Q9ULL8 SNORA18.1-201ENST00000363418 128 ntBASIC-0.29□□□□□ -2.46
SHROOM4Q9ULL8 SNORA7.5-201ENST00000410672 110 ntBASIC-0.29□□□□□ -2.46
SHROOM4Q9ULL8 MIR4677-201ENST00000584153 80 ntBASIC-0.29□□□□□ -2.46
SHROOM4Q9ULL8 RNU6-90P-201ENST00000606352 106 ntBASIC-0.29□□□□□ -2.46
SHROOM4Q9ULL8 FTX_2.1-201ENST00000618816 94 ntBASIC-0.29□□□□□ -2.46
SHROOM4Q9ULL8 MIR1255B1-201ENST00000636325 63 ntBASIC-0.29□□□□□ -2.46
SHROOM4Q9ULL8 RNU6-363P-201ENST00000362895 105 ntBASIC-0.29□□□□□ -2.46
SHROOM4Q9ULL8 RNU6-886P-201ENST00000384319 105 ntBASIC-0.29□□□□□ -2.46
SHROOM4Q9ULL8 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.29□□□□□ -2.46
SHROOM4Q9ULL8 MT-TQ-201ENST00000387372 72 ntBASIC-0.29□□□□□ -2.46
SHROOM4Q9ULL8 RNU7-165P-201ENST00000458864 60 ntBASIC-0.29□□□□□ -2.46
SHROOM4Q9ULL8 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.29□□□□□ -2.46
SHROOM4Q9ULL8 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.3□□□□□ -2.46
SHROOM4Q9ULL8 MIR548D2-201ENST00000384955 97 ntBASIC-0.3□□□□□ -2.46
SHROOM4Q9ULL8 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.3□□□□□ -2.46
SHROOM4Q9ULL8 SPINT5P-201ENST00000448174 155 ntBASIC-0.3□□□□□ -2.46
SHROOM4Q9ULL8 SNORD4A-201ENST00000459174 72 ntBASIC-0.3□□□□□ -2.46
SHROOM4Q9ULL8 RNU6-320P-201ENST00000516511 106 ntBASIC-0.3□□□□□ -2.46
SHROOM4Q9ULL8 NAMPTP3-201ENST00000569273 224 ntBASIC-0.3□□□□□ -2.46
SHROOM4Q9ULL8 SNORD115-44-201ENST00000365391 82 ntBASIC-0.31□□□□□ -2.46
SHROOM4Q9ULL8 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.31□□□□□ -2.46
SHROOM4Q9ULL8 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.31□□□□□ -2.46
SHROOM4Q9ULL8 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.31□□□□□ -2.46
SHROOM4Q9ULL8 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.32□□□□□ -2.46
SHROOM4Q9ULL8 SNORA75.1-201ENST00000391130 148 ntBASIC-0.32□□□□□ -2.46
SHROOM4Q9ULL8 RNU6-243P-201ENST00000391140 107 ntBASIC-0.32□□□□□ -2.46
SHROOM4Q9ULL8 RNA5SP163-201ENST00000410304 99 ntBASIC-0.32□□□□□ -2.46
SHROOM4Q9ULL8 AC084368.1-201ENST00000620935 65 ntBASIC-0.32□□□□□ -2.46
SHROOM4Q9ULL8 RNA5SP205-201ENST00000364653 136 ntBASIC-0.33□□□□□ -2.46
SHROOM4Q9ULL8 RNU6-409P-201ENST00000384114 104 ntBASIC-0.33□□□□□ -2.46
SHROOM4Q9ULL8 MIR198-201ENST00000637333 62 ntBASIC-0.33□□□□□ -2.46
SHROOM4Q9ULL8 MIR569-201ENST00000385228 96 ntBASIC-0.34□□□□□ -2.46
SHROOM4Q9ULL8 MIR3925-201ENST00000584674 77 ntBASIC-0.34□□□□□ -2.46
SHROOM4Q9ULL8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.35□□□□□ -2.46
SHROOM4Q9ULL8 RNA5SP484-201ENST00000458857 111 ntBASIC-0.35□□□□□ -2.46
SHROOM4Q9ULL8 SNORA32.3-201ENST00000384772 121 ntBASIC-0.35□□□□□ -2.47
SHROOM4Q9ULL8 MIR617-201ENST00000385030 97 ntBASIC-0.35□□□□□ -2.47
SHROOM4Q9ULL8 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.35□□□□□ -2.47
SHROOM4Q9ULL8 RNU6-180P-201ENST00000516697 61 ntBASIC-0.35□□□□□ -2.47
SHROOM4Q9ULL8 RNU6-161P-201ENST00000363051 106 ntBASIC-0.36□□□□□ -2.47
SHROOM4Q9ULL8 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.36□□□□□ -2.47
SHROOM4Q9ULL8 SNORD38.1-201ENST00000363863 68 ntBASIC-0.36□□□□□ -2.47
SHROOM4Q9ULL8 RNU1-141P-201ENST00000364623 158 ntBASIC-0.36□□□□□ -2.47
SHROOM4Q9ULL8 RNU6-735P-201ENST00000410612 107 ntBASIC-0.36□□□□□ -2.47
SHROOM4Q9ULL8 AC025166.1-201ENST00000612411 163 ntBASIC-0.36□□□□□ -2.47
SHROOM4Q9ULL8 RNU4-32P-201ENST00000363404 141 ntBASIC-0.37□□□□□ -2.47
SHROOM4Q9ULL8 U4.2-201ENST00000618561 85 ntBASIC-0.37□□□□□ -2.47
SHROOM4Q9ULL8 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.38□□□□□ -2.47
SHROOM4Q9ULL8 SNORD14C-201ENST00000365382 88 ntBASIC-0.38□□□□□ -2.47
SHROOM4Q9ULL8 MIR196A2-201ENST00000385189 110 ntBASIC-0.38□□□□□ -2.47
SHROOM4Q9ULL8 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.38□□□□□ -2.47
SHROOM4Q9ULL8 uc_338.10-201ENST00000621872 182 ntBASIC-0.38□□□□□ -2.47
SHROOM4Q9ULL8 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 237.3 ms