Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MIR8087-201ENST00000612745 78 ntBASIC0.31□□□□□ -2.36
RTL3Q8N8U3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
RTL3Q8N8U3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.3□□□□□ -2.36
RTL3Q8N8U3 RNU6-832P-201ENST00000363319 107 ntBASIC0.3□□□□□ -2.36
RTL3Q8N8U3 RNU6-1099P-201ENST00000363533 107 ntBASIC0.3□□□□□ -2.36
RTL3Q8N8U3 RNU6-476P-201ENST00000384726 107 ntBASIC0.3□□□□□ -2.36
RTL3Q8N8U3 Y_RNA.809-201ENST00000516058 95 ntBASIC0.3□□□□□ -2.36
RTL3Q8N8U3 RNA5SP227-201ENST00000516184 113 ntBASIC0.3□□□□□ -2.36
RTL3Q8N8U3 RNA5SP330-201ENST00000517096 96 ntBASIC0.3□□□□□ -2.36
RTL3Q8N8U3 MTND5P40-201ENST00000559945 246 ntBASIC0.3□□□□□ -2.36
RTL3Q8N8U3 AL162376.1-201ENST00000624117 175 ntBASIC0.3□□□□□ -2.36
RTL3Q8N8U3 SNORD36A-201ENST00000362874 73 ntBASIC0.29□□□□□ -2.36
RTL3Q8N8U3 RNU6-1163P-201ENST00000364516 107 ntBASIC0.29□□□□□ -2.36
RTL3Q8N8U3 MIR516A2-201ENST00000384888 90 ntBASIC0.29□□□□□ -2.36
RTL3Q8N8U3 MIR516A1-201ENST00000385033 90 ntBASIC0.29□□□□□ -2.36
RTL3Q8N8U3 RNU2-59P-201ENST00000410482 191 ntBASIC0.29□□□□□ -2.36
RTL3Q8N8U3 RNU6-1064P-201ENST00000410626 104 ntBASIC0.29□□□□□ -2.36
RTL3Q8N8U3 RNU6-848P-201ENST00000515948 107 ntBASIC0.29□□□□□ -2.36
RTL3Q8N8U3 RNU6-617P-201ENST00000516147 107 ntBASIC0.29□□□□□ -2.36
RTL3Q8N8U3 RNU6-473P-201ENST00000516164 107 ntBASIC0.29□□□□□ -2.36
RTL3Q8N8U3 RNU6-1049P-201ENST00000516414 107 ntBASIC0.29□□□□□ -2.36
RTL3Q8N8U3 RNU6-789P-201ENST00000517105 102 ntBASIC0.29□□□□□ -2.36
RTL3Q8N8U3 MIR3613-201ENST00000579844 87 ntBASIC0.29□□□□□ -2.36
RTL3Q8N8U3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.29□□□□□ -2.36
RTL3Q8N8U3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.29□□□□□ -2.36
RTL3Q8N8U3 MIR103A1-201ENST00000362165 78 ntBASIC0.28□□□□□ -2.36
RTL3Q8N8U3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
RTL3Q8N8U3 RNU6-1254P-201ENST00000391266 104 ntBASIC0.28□□□□□ -2.36
RTL3Q8N8U3 RNU2-51P-201ENST00000410708 197 ntBASIC0.28□□□□□ -2.36
RTL3Q8N8U3 SPINT5P-201ENST00000448174 155 ntBASIC0.28□□□□□ -2.36
RTL3Q8N8U3 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
RTL3Q8N8U3 RNU6-412P-201ENST00000516434 106 ntBASIC0.28□□□□□ -2.36
RTL3Q8N8U3 SNORA62.5-201ENST00000516634 120 ntBASIC0.28□□□□□ -2.36
RTL3Q8N8U3 RNU1-29P-201ENST00000606574 126 ntBASIC0.28□□□□□ -2.36
RTL3Q8N8U3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.28□□□□□ -2.36
RTL3Q8N8U3 Y_RNA.57-201ENST00000362806 113 ntBASIC0.27□□□□□ -2.37
RTL3Q8N8U3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.27□□□□□ -2.37
RTL3Q8N8U3 RNU6-1107P-201ENST00000364817 104 ntBASIC0.27□□□□□ -2.37
RTL3Q8N8U3 RNU6-1014P-201ENST00000383940 103 ntBASIC0.27□□□□□ -2.37
RTL3Q8N8U3 AC069271.1-201ENST00000445577 156 ntBASIC0.27□□□□□ -2.37
RTL3Q8N8U3 RNU6-313P-201ENST00000516317 112 ntBASIC0.27□□□□□ -2.37
RTL3Q8N8U3 AC096720.1-201ENST00000604441 183 ntBASIC0.27□□□□□ -2.37
RTL3Q8N8U3 MIR6755-201ENST00000619993 66 ntBASIC0.27□□□□□ -2.37
RTL3Q8N8U3 AC067863.3-201ENST00000624172 122 ntBASIC0.27□□□□□ -2.37
RTL3Q8N8U3 RNU6-1244P-201ENST00000363614 108 ntBASIC0.26□□□□□ -2.37
RTL3Q8N8U3 Y_RNA.221-201ENST00000364248 96 ntBASIC0.26□□□□□ -2.37
RTL3Q8N8U3 RNU6-716P-201ENST00000365621 103 ntBASIC0.26□□□□□ -2.37
RTL3Q8N8U3 RNU6-524P-201ENST00000384270 107 ntBASIC0.26□□□□□ -2.37
RTL3Q8N8U3 RNU6-1154P-201ENST00000391001 104 ntBASIC0.26□□□□□ -2.37
RTL3Q8N8U3 RNU7-104P-201ENST00000459398 79 ntBASIC0.26□□□□□ -2.37
RTL3Q8N8U3 RNU6-589P-201ENST00000516485 107 ntBASIC0.26□□□□□ -2.37
RTL3Q8N8U3 MIR4439-201ENST00000583746 80 ntBASIC0.26□□□□□ -2.37
RTL3Q8N8U3 AL109933.3-201ENST00000619095 188 ntBASIC0.26□□□□□ -2.37
RTL3Q8N8U3 Y_RNA.78-201ENST00000362970 110 ntBASIC0.25□□□□□ -2.37
RTL3Q8N8U3 MIR1197-201ENST00000408818 88 ntBASIC0.25□□□□□ -2.37
RTL3Q8N8U3 RNU4-61P-201ENST00000411243 107 ntBASIC0.25□□□□□ -2.37
RTL3Q8N8U3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.25□□□□□ -2.37
RTL3Q8N8U3 AC141557.1-201ENST00000540982 400 ntBASIC0.25□□□□□ -2.37
RTL3Q8N8U3 MIR3920-201ENST00000581751 86 ntBASIC0.25□□□□□ -2.37
RTL3Q8N8U3 Y_RNA.273-201ENST00000364703 102 ntBASIC0.24□□□□□ -2.37
RTL3Q8N8U3 RNU6-1056P-201ENST00000383996 107 ntBASIC0.24□□□□□ -2.37
RTL3Q8N8U3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.24□□□□□ -2.37
RTL3Q8N8U3 MIR6129-201ENST00000616087 109 ntBASIC0.24□□□□□ -2.37
RTL3Q8N8U3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.23□□□□□ -2.37
RTL3Q8N8U3 RNU6-1125P-201ENST00000363601 107 ntBASIC0.23□□□□□ -2.37
RTL3Q8N8U3 SNORD45B-201ENST00000364617 72 ntBASIC0.23□□□□□ -2.37
RTL3Q8N8U3 Y_RNA.374-201ENST00000365606 101 ntBASIC0.23□□□□□ -2.37
RTL3Q8N8U3 RNU6-480P-201ENST00000384332 107 ntBASIC0.23□□□□□ -2.37
RTL3Q8N8U3 RNU6-243P-201ENST00000391140 107 ntBASIC0.23□□□□□ -2.37
RTL3Q8N8U3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.23□□□□□ -2.37
RTL3Q8N8U3 RNU6-904P-201ENST00000516206 101 ntBASIC0.23□□□□□ -2.37
RTL3Q8N8U3 RNU6-537P-201ENST00000517277 103 ntBASIC0.23□□□□□ -2.37
RTL3Q8N8U3 MTRNR2L2-201ENST00000604882 87 ntBASIC0.23□□□□□ -2.37
RTL3Q8N8U3 Y_RNA.10-201ENST00000362371 110 ntBASIC0.22□□□□□ -2.37
RTL3Q8N8U3 Y_RNA.95-201ENST00000363079 95 ntBASIC0.22□□□□□ -2.37
RTL3Q8N8U3 Y_RNA.163-201ENST00000363702 113 ntBASIC0.22□□□□□ -2.37
RTL3Q8N8U3 SNORD115-44-201ENST00000365391 82 ntBASIC0.22□□□□□ -2.37
RTL3Q8N8U3 RNU6-269P-201ENST00000391077 97 ntBASIC0.22□□□□□ -2.37
RTL3Q8N8U3 Y_RNA.601-201ENST00000410500 113 ntBASIC0.22□□□□□ -2.37
RTL3Q8N8U3 AL606753.1-201ENST00000427435 87 ntBASIC0.22□□□□□ -2.37
RTL3Q8N8U3 AC109327.2-201ENST00000448339 378 ntBASIC0.22□□□□□ -2.37
RTL3Q8N8U3 RNU7-13P-201ENST00000516413 62 ntBASIC0.22□□□□□ -2.37
RTL3Q8N8U3 MIR4514-201ENST00000581410 57 ntBASIC0.22□□□□□ -2.37
RTL3Q8N8U3 RNU4-36P-201ENST00000364294 144 ntBASIC0.21□□□□□ -2.38
RTL3Q8N8U3 MIR181B2-201ENST00000385004 89 ntBASIC0.21□□□□□ -2.38
RTL3Q8N8U3 Y_RNA.659-201ENST00000515994 113 ntBASIC0.21□□□□□ -2.38
RTL3Q8N8U3 Y_RNA.709-201ENST00000516952 92 ntBASIC0.21□□□□□ -2.38
RTL3Q8N8U3 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
RTL3Q8N8U3 MIR5706-201ENST00000579841 80 ntBASIC0.21□□□□□ -2.38
RTL3Q8N8U3 MIR548AG2-201ENST00000581228 64 ntBASIC0.21□□□□□ -2.38
RTL3Q8N8U3 uc_338.28-201ENST00000612082 187 ntBASIC0.21□□□□□ -2.38
RTL3Q8N8U3 TRDV1-202ENST00000621643 102 ntBASIC0.21□□□□□ -2.38
RTL3Q8N8U3 AC073869.9-201ENST00000641610 120 ntBASIC0.21□□□□□ -2.38
RTL3Q8N8U3 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
RTL3Q8N8U3 RNU6-815P-201ENST00000384080 113 ntBASIC0.2□□□□□ -2.38
RTL3Q8N8U3 RNU6-106P-201ENST00000384405 107 ntBASIC0.2□□□□□ -2.38
RTL3Q8N8U3 MIR548L-201ENST00000408303 86 ntBASIC0.2□□□□□ -2.38
RTL3Q8N8U3 Y_RNA.629-201ENST00000411368 105 ntBASIC0.2□□□□□ -2.38
RTL3Q8N8U3 MIR4752-201ENST00000579672 72 ntBASIC0.2□□□□□ -2.38
RTL3Q8N8U3 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms