Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
PHF1O43189 Y_RNA.49-201ENST00000362714 112 ntBASIC0.37□□□□□ -2.35
PHF1O43189 RNY3P2-201ENST00000362918 102 ntBASIC0.37□□□□□ -2.35
PHF1O43189 RNU6-1260P-201ENST00000362944 107 ntBASIC0.37□□□□□ -2.35
PHF1O43189 Y_RNA.342-201ENST00000365352 113 ntBASIC0.37□□□□□ -2.35
PHF1O43189 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
PHF1O43189 MIR548G-201ENST00000408442 89 ntBASIC0.37□□□□□ -2.35
PHF1O43189 RNU6-1064P-201ENST00000410626 104 ntBASIC0.37□□□□□ -2.35
PHF1O43189 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.37□□□□□ -2.35
PHF1O43189 RNU6-313P-201ENST00000516317 112 ntBASIC0.37□□□□□ -2.35
PHF1O43189 MIR4636-201ENST00000582271 80 ntBASIC0.37□□□□□ -2.35
PHF1O43189 AC244669.1-204ENST00000621564 178 ntBASIC0.37□□□□□ -2.35
PHF1O43189 AL512310.12-203ENST00000640543 90 ntBASIC0.37□□□□□ -2.35
PHF1O43189 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
PHF1O43189 RNU6-832P-201ENST00000363319 107 ntBASIC0.36□□□□□ -2.35
PHF1O43189 RNU6-1099P-201ENST00000363533 107 ntBASIC0.36□□□□□ -2.35
PHF1O43189 RNU6-1154P-201ENST00000391001 104 ntBASIC0.36□□□□□ -2.35
PHF1O43189 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.36□□□□□ -2.35
PHF1O43189 RNU6-1265P-201ENST00000516342 103 ntBASIC0.36□□□□□ -2.35
PHF1O43189 RNA5SP268-201ENST00000516828 124 ntBASIC0.36□□□□□ -2.35
PHF1O43189 RNU7-161P-201ENST00000517289 62 ntBASIC0.36□□□□□ -2.35
PHF1O43189 MIR7107-201ENST00000611489 80 ntBASIC0.36□□□□□ -2.35
PHF1O43189 AL627230.5-201ENST00000619807 58 ntBASIC0.36□□□□□ -2.35
PHF1O43189 MIR6759-201ENST00000638110 65 ntBASIC0.36□□□□□ -2.35
PHF1O43189 SNORD115-24-201ENST00000363528 82 ntBASIC0.35□□□□□ -2.35
PHF1O43189 RNU6-1229P-201ENST00000364295 107 ntBASIC0.35□□□□□ -2.35
PHF1O43189 MIR329-2-201ENST00000385029 84 ntBASIC0.35□□□□□ -2.35
PHF1O43189 MIR599-201ENST00000385069 95 ntBASIC0.35□□□□□ -2.35
PHF1O43189 RNU7-106P-201ENST00000459514 67 ntBASIC0.35□□□□□ -2.35
PHF1O43189 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
PHF1O43189 RNU6-412P-201ENST00000516434 106 ntBASIC0.35□□□□□ -2.35
PHF1O43189 RNU6-589P-201ENST00000516485 107 ntBASIC0.35□□□□□ -2.35
PHF1O43189 RNU6-90P-201ENST00000606352 106 ntBASIC0.35□□□□□ -2.35
PHF1O43189 AC067863.3-201ENST00000624172 122 ntBASIC0.35□□□□□ -2.35
PHF1O43189 AC091304.10-201ENST00000641554 121 ntBASIC0.35□□□□□ -2.35
PHF1O43189 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
PHF1O43189 RNU6-726P-201ENST00000364680 107 ntBASIC0.34□□□□□ -2.36
PHF1O43189 Y_RNA.273-201ENST00000364703 102 ntBASIC0.34□□□□□ -2.36
PHF1O43189 RNU6-1107P-201ENST00000364817 104 ntBASIC0.34□□□□□ -2.36
PHF1O43189 RNU6-1126P-201ENST00000384002 107 ntBASIC0.34□□□□□ -2.36
PHF1O43189 SNORD41.1-201ENST00000391000 69 ntBASIC0.34□□□□□ -2.36
PHF1O43189 RNU7-195P-201ENST00000458793 62 ntBASIC0.34□□□□□ -2.36
PHF1O43189 MIR3613-201ENST00000579844 87 ntBASIC0.34□□□□□ -2.36
PHF1O43189 SNORA25.18-201ENST00000607153 114 ntBASIC0.34□□□□□ -2.36
PHF1O43189 SNORD44.1-201ENST00000363202 61 ntBASIC0.33□□□□□ -2.36
PHF1O43189 RNU6-1163P-201ENST00000364516 107 ntBASIC0.33□□□□□ -2.36
PHF1O43189 RNU6-1014P-201ENST00000383940 103 ntBASIC0.33□□□□□ -2.36
PHF1O43189 RNU6-1056P-201ENST00000383996 107 ntBASIC0.33□□□□□ -2.36
PHF1O43189 RNU6-863P-201ENST00000515989 104 ntBASIC0.33□□□□□ -2.36
PHF1O43189 Y_RNA.809-201ENST00000516058 95 ntBASIC0.33□□□□□ -2.36
PHF1O43189 MTND5P40-201ENST00000559945 246 ntBASIC0.33□□□□□ -2.36
PHF1O43189 MIR4439-201ENST00000583746 80 ntBASIC0.33□□□□□ -2.36
PHF1O43189 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.33□□□□□ -2.36
PHF1O43189 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.33□□□□□ -2.36
PHF1O43189 SNORD36A-201ENST00000362874 73 ntBASIC0.32□□□□□ -2.36
PHF1O43189 Y_RNA.78-201ENST00000362970 110 ntBASIC0.32□□□□□ -2.36
PHF1O43189 RNU6-1244P-201ENST00000363614 108 ntBASIC0.32□□□□□ -2.36
PHF1O43189 MIR516A2-201ENST00000384888 90 ntBASIC0.32□□□□□ -2.36
PHF1O43189 MIR516A1-201ENST00000385033 90 ntBASIC0.32□□□□□ -2.36
PHF1O43189 SNORD71-201ENST00000411292 86 ntBASIC0.32□□□□□ -2.36
PHF1O43189 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.32□□□□□ -2.36
PHF1O43189 AL606753.1-201ENST00000427435 87 ntBASIC0.32□□□□□ -2.36
PHF1O43189 MIR5589-201ENST00000579442 60 ntBASIC0.32□□□□□ -2.36
PHF1O43189 AC096720.1-201ENST00000604441 183 ntBASIC0.32□□□□□ -2.36
PHF1O43189 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.32□□□□□ -2.36
PHF1O43189 AL162376.1-201ENST00000624117 175 ntBASIC0.32□□□□□ -2.36
PHF1O43189 RNU6-1254P-201ENST00000391266 104 ntBASIC0.31□□□□□ -2.36
PHF1O43189 Y_RNA.629-201ENST00000411368 105 ntBASIC0.31□□□□□ -2.36
PHF1O43189 SPINT5P-201ENST00000448174 155 ntBASIC0.31□□□□□ -2.36
PHF1O43189 RNU6-848P-201ENST00000515948 107 ntBASIC0.31□□□□□ -2.36
PHF1O43189 RNU6-617P-201ENST00000516147 107 ntBASIC0.31□□□□□ -2.36
PHF1O43189 RNU6-473P-201ENST00000516164 107 ntBASIC0.31□□□□□ -2.36
PHF1O43189 RNA5SP227-201ENST00000516184 113 ntBASIC0.31□□□□□ -2.36
PHF1O43189 RNU6-1049P-201ENST00000516414 107 ntBASIC0.31□□□□□ -2.36
PHF1O43189 AC141557.1-201ENST00000540982 400 ntBASIC0.31□□□□□ -2.36
PHF1O43189 RNU1-29P-201ENST00000606574 126 ntBASIC0.31□□□□□ -2.36
PHF1O43189 MIR6129-201ENST00000616087 109 ntBASIC0.31□□□□□ -2.36
PHF1O43189 RNU2-59P-201ENST00000410482 191 ntBASIC0.3□□□□□ -2.36
PHF1O43189 RNU6-904P-201ENST00000516206 101 ntBASIC0.3□□□□□ -2.36
PHF1O43189 RNU6-537P-201ENST00000517277 103 ntBASIC0.3□□□□□ -2.36
PHF1O43189 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
PHF1O43189 Y_RNA.57-201ENST00000362806 113 ntBASIC0.29□□□□□ -2.36
PHF1O43189 RNU6-1081P-201ENST00000384537 107 ntBASIC0.29□□□□□ -2.36
PHF1O43189 SNORA19-201ENST00000384737 128 ntBASIC0.29□□□□□ -2.36
PHF1O43189 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.29□□□□□ -2.36
PHF1O43189 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.29□□□□□ -2.36
PHF1O43189 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.29□□□□□ -2.36
PHF1O43189 RNU7-104P-201ENST00000459398 79 ntBASIC0.29□□□□□ -2.36
PHF1O43189 AC108740.1-201ENST00000498629 225 ntBASIC0.29□□□□□ -2.36
PHF1O43189 Y_RNA.709-201ENST00000516952 92 ntBASIC0.29□□□□□ -2.36
PHF1O43189 MIR3920-201ENST00000581751 86 ntBASIC0.29□□□□□ -2.36
PHF1O43189 MIR6755-201ENST00000619993 66 ntBASIC0.29□□□□□ -2.36
PHF1O43189 Y_RNA.10-201ENST00000362371 110 ntBASIC0.28□□□□□ -2.36
PHF1O43189 Y_RNA.95-201ENST00000363079 95 ntBASIC0.28□□□□□ -2.36
PHF1O43189 Y_RNA.163-201ENST00000363702 113 ntBASIC0.28□□□□□ -2.36
PHF1O43189 Y_RNA.221-201ENST00000364248 96 ntBASIC0.28□□□□□ -2.36
PHF1O43189 SNORD45B-201ENST00000364617 72 ntBASIC0.28□□□□□ -2.36
PHF1O43189 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
PHF1O43189 RNU6-524P-201ENST00000384270 107 ntBASIC0.28□□□□□ -2.36
PHF1O43189 RNU6-106P-201ENST00000384405 107 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms