Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 RNU6-243P-201ENST00000391140 107 ntBASIC0.63□□□□□ -2.31
SAA2-SAA4A0A096LPE2 RNU6-1265P-201ENST00000516342 103 ntBASIC0.63□□□□□ -2.31
SAA2-SAA4A0A096LPE2 RNA5SP94-201ENST00000516917 108 ntBASIC0.63□□□□□ -2.31
SAA2-SAA4A0A096LPE2 RNA5SP47-201ENST00000517230 109 ntBASIC0.63□□□□□ -2.31
SAA2-SAA4A0A096LPE2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.63□□□□□ -2.31
SAA2-SAA4A0A096LPE2 Y_RNA.648-201ENST00000459455 110 ntBASIC0.62□□□□□ -2.31
SAA2-SAA4A0A096LPE2 RNU6-75P-201ENST00000515944 104 ntBASIC0.62□□□□□ -2.31
SAA2-SAA4A0A096LPE2 RNA5SP102-201ENST00000516865 106 ntBASIC0.62□□□□□ -2.31
SAA2-SAA4A0A096LPE2 AC244669.1-204ENST00000621564 178 ntBASIC0.62□□□□□ -2.31
SAA2-SAA4A0A096LPE2 MIR6866-201ENST00000638146 69 ntBASIC0.62□□□□□ -2.31
SAA2-SAA4A0A096LPE2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.62□□□□□ -2.31
SAA2-SAA4A0A096LPE2 MIR373-201ENST00000362273 69 ntBASIC0.61□□□□□ -2.31
SAA2-SAA4A0A096LPE2 Y_RNA.283-201ENST00000364798 112 ntBASIC0.61□□□□□ -2.31
SAA2-SAA4A0A096LPE2 MIR4639-201ENST00000584938 69 ntBASIC0.61□□□□□ -2.31
SAA2-SAA4A0A096LPE2 TRDV1-202ENST00000621643 102 ntBASIC0.61□□□□□ -2.31
SAA2-SAA4A0A096LPE2 MIR96-201ENST00000362288 78 ntBASIC0.6□□□□□ -2.31
SAA2-SAA4A0A096LPE2 Y_RNA.96-201ENST00000363092 109 ntBASIC0.6□□□□□ -2.31
SAA2-SAA4A0A096LPE2 SNORD116-10-201ENST00000363791 102 ntBASIC0.6□□□□□ -2.31
SAA2-SAA4A0A096LPE2 RNU6-1131P-201ENST00000364955 107 ntBASIC0.6□□□□□ -2.31
SAA2-SAA4A0A096LPE2 RNU4-45P-201ENST00000365469 141 ntBASIC0.6□□□□□ -2.31
SAA2-SAA4A0A096LPE2 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
SAA2-SAA4A0A096LPE2 RNU6-469P-201ENST00000516253 101 ntBASIC0.6□□□□□ -2.31
SAA2-SAA4A0A096LPE2 RNU6-135P-201ENST00000516769 101 ntBASIC0.6□□□□□ -2.31
SAA2-SAA4A0A096LPE2 MIR6828-201ENST00000636181 60 ntBASIC0.6□□□□□ -2.31
SAA2-SAA4A0A096LPE2 U6.100-201ENST00000636230 99 ntBASIC0.6□□□□□ -2.31
SAA2-SAA4A0A096LPE2 RNU6-110P-201ENST00000384508 104 ntBASIC0.59□□□□□ -2.31
SAA2-SAA4A0A096LPE2 RNY4P30-201ENST00000410216 95 ntBASIC0.59□□□□□ -2.31
SAA2-SAA4A0A096LPE2 SNORD4B-201ENST00000459083 72 ntBASIC0.59□□□□□ -2.31
SAA2-SAA4A0A096LPE2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.59□□□□□ -2.31
SAA2-SAA4A0A096LPE2 Y_RNA.4-201ENST00000362333 112 ntBASIC0.58□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNA5SP517-201ENST00000364724 117 ntBASIC0.58□□□□□ -2.32
SAA2-SAA4A0A096LPE2 MIR140-201ENST00000385282 100 ntBASIC0.58□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNU7-104P-201ENST00000459398 79 ntBASIC0.58□□□□□ -2.32
SAA2-SAA4A0A096LPE2 Y_RNA.694-201ENST00000516677 117 ntBASIC0.58□□□□□ -2.32
SAA2-SAA4A0A096LPE2 AC026421.1-201ENST00000519101 163 ntBASIC0.58□□□□□ -2.32
SAA2-SAA4A0A096LPE2 MIR5582-201ENST00000579697 68 ntBASIC0.58□□□□□ -2.32
SAA2-SAA4A0A096LPE2 MTRNR2L2-201ENST00000604882 87 ntBASIC0.58□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNU6-726P-201ENST00000364680 107 ntBASIC0.57□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.57□□□□□ -2.32
SAA2-SAA4A0A096LPE2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.57□□□□□ -2.32
SAA2-SAA4A0A096LPE2 MIR548AG2-201ENST00000581228 64 ntBASIC0.57□□□□□ -2.32
SAA2-SAA4A0A096LPE2 MIR3920-201ENST00000581751 86 ntBASIC0.57□□□□□ -2.32
SAA2-SAA4A0A096LPE2 Y_RNA.164-201ENST00000363709 102 ntBASIC0.56□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNU1-93P-201ENST00000364704 169 ntBASIC0.56□□□□□ -2.32
SAA2-SAA4A0A096LPE2 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.56□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNU6-844P-201ENST00000517175 102 ntBASIC0.56□□□□□ -2.32
SAA2-SAA4A0A096LPE2 MIR7107-201ENST00000611489 80 ntBASIC0.56□□□□□ -2.32
SAA2-SAA4A0A096LPE2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.55□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNU6-132P-201ENST00000383863 107 ntBASIC0.55□□□□□ -2.32
SAA2-SAA4A0A096LPE2 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
SAA2-SAA4A0A096LPE2 SNORD41.1-201ENST00000391000 69 ntBASIC0.55□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNU6-466P-201ENST00000391224 103 ntBASIC0.55□□□□□ -2.32
SAA2-SAA4A0A096LPE2 Y_RNA.609-201ENST00000410669 89 ntBASIC0.55□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNA5SP170-201ENST00000517150 101 ntBASIC0.55□□□□□ -2.32
SAA2-SAA4A0A096LPE2 MIR4696-201ENST00000581431 70 ntBASIC0.55□□□□□ -2.32
SAA2-SAA4A0A096LPE2 MIR6835-201ENST00000621552 64 ntBASIC0.55□□□□□ -2.32
SAA2-SAA4A0A096LPE2 Y_RNA.220-201ENST00000364244 109 ntBASIC0.54□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNU6-716P-201ENST00000365621 103 ntBASIC0.54□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNU6-519P-201ENST00000410590 108 ntBASIC0.54□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNA5SP268-201ENST00000516828 124 ntBASIC0.54□□□□□ -2.32
SAA2-SAA4A0A096LPE2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.54□□□□□ -2.32
SAA2-SAA4A0A096LPE2 SNORA25.18-201ENST00000607153 114 ntBASIC0.54□□□□□ -2.32
SAA2-SAA4A0A096LPE2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SAA2-SAA4A0A096LPE2 MIRLET7F1-201ENST00000362202 87 ntBASIC0.53□□□□□ -2.32
SAA2-SAA4A0A096LPE2 RNU6-1126P-201ENST00000384002 107 ntBASIC0.53□□□□□ -2.32
SAA2-SAA4A0A096LPE2 MIR4536-1-201ENST00000583537 88 ntBASIC0.53□□□□□ -2.32
SAA2-SAA4A0A096LPE2 AL590095.2-201ENST00000604136 117 ntBASIC0.53□□□□□ -2.32
SAA2-SAA4A0A096LPE2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.53□□□□□ -2.32
SAA2-SAA4A0A096LPE2 AC067863.3-201ENST00000624172 122 ntBASIC0.53□□□□□ -2.32
SAA2-SAA4A0A096LPE2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 RNU6-664P-201ENST00000362381 107 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 Y_RNA.207-201ENST00000364142 106 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 SNORD115-27-201ENST00000364430 82 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 RNU6-219P-201ENST00000364728 107 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 Y_RNA.369-201ENST00000365568 117 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 MIR508-201ENST00000384857 115 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 Y_RNA.596-201ENST00000410462 109 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 RNU6-287P-201ENST00000516230 98 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 RNU7-13P-201ENST00000516413 62 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 RNU6-267P-201ENST00000516714 103 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 MIR4668-201ENST00000582284 70 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 AC092634.7-201ENST00000621022 103 ntBASIC0.52□□□□□ -2.33
SAA2-SAA4A0A096LPE2 SNORD118-201ENST00000363593 134 ntBASIC0.51□□□□□ -2.33
SAA2-SAA4A0A096LPE2 RNU6-497P-201ENST00000365316 104 ntBASIC0.51□□□□□ -2.33
SAA2-SAA4A0A096LPE2 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
SAA2-SAA4A0A096LPE2 SNORD101-201ENST00000384027 73 ntBASIC0.51□□□□□ -2.33
SAA2-SAA4A0A096LPE2 RNY1P4-201ENST00000384595 115 ntBASIC0.51□□□□□ -2.33
SAA2-SAA4A0A096LPE2 RNA5SP292-201ENST00000390974 118 ntBASIC0.51□□□□□ -2.33
SAA2-SAA4A0A096LPE2 MIR1276-201ENST00000408707 83 ntBASIC0.51□□□□□ -2.33
SAA2-SAA4A0A096LPE2 Y_RNA.620-201ENST00000411009 88 ntBASIC0.51□□□□□ -2.33
SAA2-SAA4A0A096LPE2 RNA5SP227-201ENST00000516184 113 ntBASIC0.51□□□□□ -2.33
SAA2-SAA4A0A096LPE2 RNU6-65P-201ENST00000516332 98 ntBASIC0.51□□□□□ -2.33
SAA2-SAA4A0A096LPE2 MIR3064-201ENST00000581130 66 ntBASIC0.51□□□□□ -2.33
SAA2-SAA4A0A096LPE2 MIR8070-201ENST00000616510 88 ntBASIC0.51□□□□□ -2.33
SAA2-SAA4A0A096LPE2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.51□□□□□ -2.33
SAA2-SAA4A0A096LPE2 SNORA25.9-201ENST00000365087 128 ntBASIC0.5□□□□□ -2.33
SAA2-SAA4A0A096LPE2 MIR518E-201ENST00000385252 88 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms