Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AC091304.10-201ENST00000641554 121 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 RNU6-1260P-201ENST00000362944 107 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 SNORA63.5-201ENST00000363548 123 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 SNORD49B-201ENST00000365172 72 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 SNORA32.3-201ENST00000384772 121 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.651-201ENST00000459380 103 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.686-201ENST00000516548 134 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 RNU6-1057P-201ENST00000517162 102 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 MIR4290-201ENST00000583807 95 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.08□□□□□ -2.4
SHANK1Q9Y566 SNORD114-5-201ENST00000362928 70 ntBASIC0.07□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.120-201ENST00000363304 110 ntBASIC0.07□□□□□ -2.4
SHANK1Q9Y566 RNU6-1163P-201ENST00000364516 107 ntBASIC0.07□□□□□ -2.4
SHANK1Q9Y566 RNU4-11P-201ENST00000365287 132 ntBASIC0.07□□□□□ -2.4
SHANK1Q9Y566 RNU6-1318P-201ENST00000365389 103 ntBASIC0.07□□□□□ -2.4
SHANK1Q9Y566 MIR610-201ENST00000385139 96 ntBASIC0.07□□□□□ -2.4
SHANK1Q9Y566 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.07□□□□□ -2.4
SHANK1Q9Y566 RNU7-159P-201ENST00000459284 62 ntBASIC0.07□□□□□ -2.4
SHANK1Q9Y566 AC069113.3-201ENST00000521019 150 ntBASIC0.07□□□□□ -2.4
SHANK1Q9Y566 AL162726.3-218ENST00000636401 95 ntBASIC0.07□□□□□ -2.4
SHANK1Q9Y566 RNU6-363P-201ENST00000362895 105 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 RNU6-1229P-201ENST00000364295 107 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.257-201ENST00000364596 102 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.270-201ENST00000364693 104 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.521-201ENST00000384560 114 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 MT-TI-201ENST00000387365 69 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 RNU6-269P-201ENST00000391077 97 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 MIR892B-201ENST00000401279 77 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 AC108059.2-201ENST00000434626 151 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 TRAJ51-201ENST00000504127 63 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 AC074198.2-201ENST00000508153 258 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 RNU7-2P-201ENST00000516096 62 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 RNA5SP134-201ENST00000516492 96 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.06□□□□□ -2.4
SHANK1Q9Y566 MIR4743-201ENST00000584576 69 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 AL359881.1-201ENST00000602916 267 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.213-201ENST00000364178 111 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 SNORD115-35-201ENST00000365122 82 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 AC244505.6-201ENST00000452829 130 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 RNU1-29P-201ENST00000606574 126 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 MIR8066-201ENST00000617280 78 ntBASIC0.06□□□□□ -2.4
SHANK1Q9Y566 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 RNU6-832P-201ENST00000363319 107 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 RNU6-1130P-201ENST00000365434 107 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.507-201ENST00000384500 99 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.580-201ENST00000391004 95 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 HMGN2P22-201ENST00000427588 175 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 RNU6-1061P-201ENST00000516530 99 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 MTND5P40-201ENST00000559945 246 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.360-201ENST00000365512 102 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.448-201ENST00000384185 108 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.495-201ENST00000384435 112 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 MIR644A-201ENST00000385262 94 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 SNORD41.1-201ENST00000391000 69 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 RNU7-164P-201ENST00000459221 62 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 RNU6-794P-201ENST00000517261 64 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 MIR4500-201ENST00000579472 76 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 AC108081.1-201ENST00000604358 221 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 MIR376B-201ENST00000614515 100 ntBASIC0.05□□□□□ -2.4
SHANK1Q9Y566 SNORA36.1-201ENST00000363424 132 ntBASIC0.04□□□□□ -2.4
SHANK1Q9Y566 SNORA32-201ENST00000384072 121 ntBASIC0.04□□□□□ -2.4
SHANK1Q9Y566 MIR3163-201ENST00000581592 73 ntBASIC0.04□□□□□ -2.4
SHANK1Q9Y566 MIR7107-201ENST00000611489 80 ntBASIC0.04□□□□□ -2.4
SHANK1Q9Y566 AP001340.1-201ENST00000624405 217 ntBASIC0.04□□□□□ -2.4
SHANK1Q9Y566 RNU6-302P-201ENST00000365249 107 ntBASIC0.04□□□□□ -2.4
SHANK1Q9Y566 MIR601-201ENST00000385256 79 ntBASIC0.04□□□□□ -2.4
SHANK1Q9Y566 SNORD37.2-201ENST00000391075 66 ntBASIC0.04□□□□□ -2.4
SHANK1Q9Y566 RNU6-735P-201ENST00000410612 107 ntBASIC0.04□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.690-201ENST00000516603 95 ntBASIC0.04□□□□□ -2.4
SHANK1Q9Y566 MIR4677-201ENST00000584153 80 ntBASIC0.04□□□□□ -2.4
SHANK1Q9Y566 RNU6-1104P-201ENST00000384723 104 ntBASIC0.03□□□□□ -2.4
SHANK1Q9Y566 MIR519A1-201ENST00000385257 85 ntBASIC0.03□□□□□ -2.4
SHANK1Q9Y566 MIR501-201ENST00000390204 84 ntBASIC0.03□□□□□ -2.4
SHANK1Q9Y566 RNU6-1254P-201ENST00000391266 104 ntBASIC0.03□□□□□ -2.4
SHANK1Q9Y566 RNU4-83P-201ENST00000410863 133 ntBASIC0.03□□□□□ -2.4
SHANK1Q9Y566 RNU7-104P-201ENST00000459398 79 ntBASIC0.03□□□□□ -2.4
SHANK1Q9Y566 MIR3678-201ENST00000578455 94 ntBASIC0.03□□□□□ -2.4
SHANK1Q9Y566 MIR548X2-201ENST00000579776 100 ntBASIC0.03□□□□□ -2.4
SHANK1Q9Y566 Y_RNA.32-201ENST00000362589 110 ntBASIC0.02□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.328-201ENST00000365208 113 ntBASIC0.02□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.420-201ENST00000384043 110 ntBASIC0.02□□□□□ -2.41
SHANK1Q9Y566 RNU6-1064P-201ENST00000410626 104 ntBASIC0.02□□□□□ -2.41
SHANK1Q9Y566 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.02□□□□□ -2.41
SHANK1Q9Y566 RNU6-1018P-201ENST00000516577 106 ntBASIC0.02□□□□□ -2.41
SHANK1Q9Y566 SNORD114-28-201ENST00000363610 72 ntBASIC0.02□□□□□ -2.41
SHANK1Q9Y566 RNA5SP205-201ENST00000364653 136 ntBASIC0.02□□□□□ -2.41
SHANK1Q9Y566 MIR643-201ENST00000385267 97 ntBASIC0.02□□□□□ -2.41
SHANK1Q9Y566 MIR548H2-201ENST00000408874 88 ntBASIC0.02□□□□□ -2.41
SHANK1Q9Y566 RNA5SP136-201ENST00000410906 107 ntBASIC0.02□□□□□ -2.41
SHANK1Q9Y566 RNU6-426P-201ENST00000516464 97 ntBASIC0.02□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.119-201ENST00000363301 96 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.125-201ENST00000363371 111 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.344-201ENST00000365381 112 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.398-201ENST00000383952 99 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.497-201ENST00000384447 98 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.506-201ENST00000384494 102 ntBASIC0.01□□□□□ -2.41
SHANK1Q9Y566 Y_RNA.568-201ENST00000384742 113 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 281.5 ms