Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MIR548L-201ENST00000408303 86 ntBASIC-0.11□□□□□ -2.43
HDHD3Q9BSH5 RNA5SP484-201ENST00000458857 111 ntBASIC-0.11□□□□□ -2.43
HDHD3Q9BSH5 RNU7-165P-201ENST00000458864 60 ntBASIC-0.11□□□□□ -2.43
HDHD3Q9BSH5 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.11□□□□□ -2.43
HDHD3Q9BSH5 RNU6-180P-201ENST00000516697 61 ntBASIC-0.11□□□□□ -2.43
HDHD3Q9BSH5 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.11□□□□□ -2.43
HDHD3Q9BSH5 RNU6-850P-201ENST00000516934 103 ntBASIC-0.11□□□□□ -2.43
HDHD3Q9BSH5 MTND5P40-201ENST00000559945 246 ntBASIC-0.11□□□□□ -2.43
HDHD3Q9BSH5 MIR3144-201ENST00000579460 79 ntBASIC-0.11□□□□□ -2.43
HDHD3Q9BSH5 MIR3163-201ENST00000581592 73 ntBASIC-0.11□□□□□ -2.43
HDHD3Q9BSH5 MIR8087-201ENST00000612745 78 ntBASIC-0.11□□□□□ -2.43
HDHD3Q9BSH5 MIR330-201ENST00000362196 94 ntBASIC-0.12□□□□□ -2.43
HDHD3Q9BSH5 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.12□□□□□ -2.43
HDHD3Q9BSH5 SNORD114-26-201ENST00000363543 72 ntBASIC-0.12□□□□□ -2.43
HDHD3Q9BSH5 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.12□□□□□ -2.43
HDHD3Q9BSH5 SNORD116-18-201ENST00000383961 92 ntBASIC-0.12□□□□□ -2.43
HDHD3Q9BSH5 RNU6-524P-201ENST00000384270 107 ntBASIC-0.12□□□□□ -2.43
HDHD3Q9BSH5 MIR569-201ENST00000385228 96 ntBASIC-0.12□□□□□ -2.43
HDHD3Q9BSH5 AC093423.1-201ENST00000440817 142 ntBASIC-0.12□□□□□ -2.43
HDHD3Q9BSH5 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.12□□□□□ -2.43
HDHD3Q9BSH5 FTX_2.1-201ENST00000618816 94 ntBASIC-0.12□□□□□ -2.43
HDHD3Q9BSH5 AC021753.1-201ENST00000635724 168 ntBASIC-0.12□□□□□ -2.43
HDHD3Q9BSH5 RNU6-647P-201ENST00000364243 107 ntBASIC-0.13□□□□□ -2.43
HDHD3Q9BSH5 RNU6-302P-201ENST00000365249 107 ntBASIC-0.13□□□□□ -2.43
HDHD3Q9BSH5 RNU6-652P-201ENST00000365488 107 ntBASIC-0.13□□□□□ -2.43
HDHD3Q9BSH5 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.13□□□□□ -2.43
HDHD3Q9BSH5 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.13□□□□□ -2.43
HDHD3Q9BSH5 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.13□□□□□ -2.43
HDHD3Q9BSH5 MIR892B-201ENST00000401279 77 ntBASIC-0.13□□□□□ -2.43
HDHD3Q9BSH5 RNA5SP136-201ENST00000410906 107 ntBASIC-0.13□□□□□ -2.43
HDHD3Q9BSH5 AL158147.1-201ENST00000443970 75 ntBASIC-0.13□□□□□ -2.43
HDHD3Q9BSH5 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.13□□□□□ -2.43
HDHD3Q9BSH5 MIR548X2-201ENST00000579776 100 ntBASIC-0.13□□□□□ -2.43
HDHD3Q9BSH5 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.13□□□□□ -2.43
HDHD3Q9BSH5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.14□□□□□ -2.43
HDHD3Q9BSH5 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.14□□□□□ -2.43
HDHD3Q9BSH5 RNU6-886P-201ENST00000384319 105 ntBASIC-0.14□□□□□ -2.43
HDHD3Q9BSH5 MIR516A2-201ENST00000384888 90 ntBASIC-0.14□□□□□ -2.43
HDHD3Q9BSH5 MIR516A1-201ENST00000385033 90 ntBASIC-0.14□□□□□ -2.43
HDHD3Q9BSH5 MIR876-201ENST00000401147 81 ntBASIC-0.14□□□□□ -2.43
HDHD3Q9BSH5 RNU6-781P-201ENST00000516377 101 ntBASIC-0.14□□□□□ -2.43
HDHD3Q9BSH5 AP001328.1-201ENST00000528550 176 ntBASIC-0.14□□□□□ -2.43
HDHD3Q9BSH5 NAMPTP3-201ENST00000569273 224 ntBASIC-0.14□□□□□ -2.43
HDHD3Q9BSH5 U7.6-201ENST00000610841 64 ntBASIC-0.14□□□□□ -2.43
HDHD3Q9BSH5 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.15□□□□□ -2.43
HDHD3Q9BSH5 RNU6-929P-201ENST00000384429 107 ntBASIC-0.15□□□□□ -2.43
HDHD3Q9BSH5 MIR513C-201ENST00000401352 84 ntBASIC-0.15□□□□□ -2.43
HDHD3Q9BSH5 AL078595.1-201ENST00000404458 226 ntBASIC-0.15□□□□□ -2.43
HDHD3Q9BSH5 SNORD110-201ENST00000408189 75 ntBASIC-0.15□□□□□ -2.43
HDHD3Q9BSH5 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.15□□□□□ -2.43
HDHD3Q9BSH5 RNU7-13P-201ENST00000516413 62 ntBASIC-0.15□□□□□ -2.43
HDHD3Q9BSH5 MTND5P41-201ENST00000517498 206 ntBASIC-0.15□□□□□ -2.43
HDHD3Q9BSH5 MIR5190-201ENST00000581537 80 ntBASIC-0.15□□□□□ -2.43
HDHD3Q9BSH5 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.15□□□□□ -2.43
HDHD3Q9BSH5 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.16□□□□□ -2.44
HDHD3Q9BSH5 RNU6-509P-201ENST00000363519 107 ntBASIC-0.16□□□□□ -2.44
HDHD3Q9BSH5 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.16□□□□□ -2.44
HDHD3Q9BSH5 RNU1-141P-201ENST00000364623 158 ntBASIC-0.16□□□□□ -2.44
HDHD3Q9BSH5 RNU6V-201ENST00000384105 107 ntBASIC-0.16□□□□□ -2.44
HDHD3Q9BSH5 MIR548D2-201ENST00000384955 97 ntBASIC-0.16□□□□□ -2.44
HDHD3Q9BSH5 MIR519E-201ENST00000385075 84 ntBASIC-0.16□□□□□ -2.44
HDHD3Q9BSH5 snosnR66.1-201ENST00000391095 99 ntBASIC-0.16□□□□□ -2.44
HDHD3Q9BSH5 MIR1197-201ENST00000408818 88 ntBASIC-0.16□□□□□ -2.44
HDHD3Q9BSH5 SNORD36A-201ENST00000362874 73 ntBASIC-0.17□□□□□ -2.44
HDHD3Q9BSH5 RNU6-363P-201ENST00000362895 105 ntBASIC-0.17□□□□□ -2.44
HDHD3Q9BSH5 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.17□□□□□ -2.44
HDHD3Q9BSH5 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.17□□□□□ -2.44
HDHD3Q9BSH5 RNA5SP163-201ENST00000410304 99 ntBASIC-0.17□□□□□ -2.44
HDHD3Q9BSH5 AC006210.1-201ENST00000424882 111 ntBASIC-0.17□□□□□ -2.44
HDHD3Q9BSH5 SNORA25.13-201ENST00000516395 103 ntBASIC-0.17□□□□□ -2.44
HDHD3Q9BSH5 RNU6-182P-201ENST00000516970 105 ntBASIC-0.17□□□□□ -2.44
HDHD3Q9BSH5 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.17□□□□□ -2.44
HDHD3Q9BSH5 U7.2-201ENST00000607576 63 ntBASIC-0.17□□□□□ -2.44
HDHD3Q9BSH5 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.17□□□□□ -2.44
HDHD3Q9BSH5 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.18□□□□□ -2.44
HDHD3Q9BSH5 SNORA32.1-201ENST00000364514 115 ntBASIC-0.18□□□□□ -2.44
HDHD3Q9BSH5 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.18□□□□□ -2.44
HDHD3Q9BSH5 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.18□□□□□ -2.44
HDHD3Q9BSH5 MIR617-201ENST00000385030 97 ntBASIC-0.18□□□□□ -2.44
HDHD3Q9BSH5 MIR1263-201ENST00000408324 86 ntBASIC-0.18□□□□□ -2.44
HDHD3Q9BSH5 RNU7-159P-201ENST00000459284 62 ntBASIC-0.18□□□□□ -2.44
HDHD3Q9BSH5 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.18□□□□□ -2.44
HDHD3Q9BSH5 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.18□□□□□ -2.44
HDHD3Q9BSH5 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.19□□□□□ -2.44
HDHD3Q9BSH5 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.19□□□□□ -2.44
HDHD3Q9BSH5 RNU7-74P-201ENST00000459104 62 ntBASIC-0.19□□□□□ -2.44
HDHD3Q9BSH5 SNORD115-44-201ENST00000365391 82 ntBASIC-0.2□□□□□ -2.44
HDHD3Q9BSH5 SNORA75.1-201ENST00000391130 148 ntBASIC-0.2□□□□□ -2.44
HDHD3Q9BSH5 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.2□□□□□ -2.44
HDHD3Q9BSH5 SNORA7.5-201ENST00000410672 110 ntBASIC-0.2□□□□□ -2.44
HDHD3Q9BSH5 RNA5SP272-201ENST00000516095 111 ntBASIC-0.2□□□□□ -2.44
HDHD3Q9BSH5 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.2□□□□□ -2.44
HDHD3Q9BSH5 MIR1295B-201ENST00000636144 60 ntBASIC-0.2□□□□□ -2.44
HDHD3Q9BSH5 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.21□□□□□ -2.44
HDHD3Q9BSH5 SNORD38.1-201ENST00000363863 68 ntBASIC-0.21□□□□□ -2.44
HDHD3Q9BSH5 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.21□□□□□ -2.44
HDHD3Q9BSH5 SNORD58C-201ENST00000365223 64 ntBASIC-0.21□□□□□ -2.44
HDHD3Q9BSH5 SNORD38.2-201ENST00000384470 69 ntBASIC-0.21□□□□□ -2.44
HDHD3Q9BSH5 MIR548G-201ENST00000408442 89 ntBASIC-0.21□□□□□ -2.44
HDHD3Q9BSH5 AC109327.2-201ENST00000448339 378 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms