Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 RNU6-811P-201ENST00000384069 107 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 RNU6-571P-201ENST00000384128 107 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 SNORD38.2-201ENST00000384470 69 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 MIR759-201ENST00000390224 91 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 MIR876-201ENST00000401147 81 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 Z95118.1-201ENST00000421372 247 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 AC006210.1-201ENST00000424882 111 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 HMGN2P22-201ENST00000427588 175 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 HAR1A.1-201ENST00000459583 118 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 RNY4P20-201ENST00000516678 93 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 MIR4645-201ENST00000583158 77 ntBASIC-0.28□□□□□ -2.45
RPUSD3Q6P087 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.29□□□□□ -2.46
RPUSD3Q6P087 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.29□□□□□ -2.46
RPUSD3Q6P087 RNU6-463P-201ENST00000384340 107 ntBASIC-0.29□□□□□ -2.46
RPUSD3Q6P087 SNORD110-201ENST00000408189 75 ntBASIC-0.29□□□□□ -2.46
RPUSD3Q6P087 BX276092.1-201ENST00000427368 251 ntBASIC-0.29□□□□□ -2.46
RPUSD3Q6P087 SNORD126-201ENST00000459475 77 ntBASIC-0.29□□□□□ -2.46
RPUSD3Q6P087 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.29□□□□□ -2.46
RPUSD3Q6P087 MIR4436A-201ENST00000585278 85 ntBASIC-0.29□□□□□ -2.46
RPUSD3Q6P087 AC141273.2-201ENST00000618989 130 ntBASIC-0.29□□□□□ -2.46
RPUSD3Q6P087 AL391099.1-201ENST00000624635 187 ntBASIC-0.29□□□□□ -2.46
RPUSD3Q6P087 SNORD14C-201ENST00000365382 88 ntBASIC-0.3□□□□□ -2.46
RPUSD3Q6P087 AC109327.2-201ENST00000448339 378 ntBASIC-0.3□□□□□ -2.46
RPUSD3Q6P087 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.3□□□□□ -2.46
RPUSD3Q6P087 RNU7-13P-201ENST00000516413 62 ntBASIC-0.3□□□□□ -2.46
RPUSD3Q6P087 AC022559.1-201ENST00000520905 205 ntBASIC-0.3□□□□□ -2.46
RPUSD3Q6P087 MIR4432-201ENST00000581823 84 ntBASIC-0.3□□□□□ -2.46
RPUSD3Q6P087 MIR6514-201ENST00000622549 70 ntBASIC-0.3□□□□□ -2.46
RPUSD3Q6P087 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.3□□□□□ -2.46
RPUSD3Q6P087 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.3□□□□□ -2.46
RPUSD3Q6P087 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.31□□□□□ -2.46
RPUSD3Q6P087 SNORD114-12-201ENST00000365400 75 ntBASIC-0.31□□□□□ -2.46
RPUSD3Q6P087 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.31□□□□□ -2.46
RPUSD3Q6P087 SNORD63B-201ENST00000411005 70 ntBASIC-0.31□□□□□ -2.46
RPUSD3Q6P087 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.31□□□□□ -2.46
RPUSD3Q6P087 RNA5SP169-201ENST00000517268 117 ntBASIC-0.31□□□□□ -2.46
RPUSD3Q6P087 MIR3666-201ENST00000607845 111 ntBASIC-0.31□□□□□ -2.46
RPUSD3Q6P087 RN7SL660P-201ENST00000614852 299 ntBASIC-0.31□□□□□ -2.46
RPUSD3Q6P087 MIR3658-201ENST00000636291 56 ntBASIC-0.31□□□□□ -2.46
RPUSD3Q6P087 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.32□□□□□ -2.46
RPUSD3Q6P087 SNORD49B-201ENST00000365172 72 ntBASIC-0.32□□□□□ -2.46
RPUSD3Q6P087 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.32□□□□□ -2.46
RPUSD3Q6P087 RNU6-46P-201ENST00000383860 107 ntBASIC-0.32□□□□□ -2.46
RPUSD3Q6P087 RNU6-616P-201ENST00000384353 107 ntBASIC-0.32□□□□□ -2.46
RPUSD3Q6P087 RPS29P8-201ENST00000445109 171 ntBASIC-0.32□□□□□ -2.46
RPUSD3Q6P087 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.32□□□□□ -2.46
RPUSD3Q6P087 AP001180.6-201ENST00000584918 159 ntBASIC-0.32□□□□□ -2.46
RPUSD3Q6P087 MIR148A-201ENST00000362215 68 ntBASIC-0.33□□□□□ -2.46
RPUSD3Q6P087 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.33□□□□□ -2.46
RPUSD3Q6P087 RNU6-284P-201ENST00000411105 106 ntBASIC-0.33□□□□□ -2.46
RPUSD3Q6P087 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.33□□□□□ -2.46
RPUSD3Q6P087 CR383656.4-201ENST00000546909 122 ntBASIC-0.33□□□□□ -2.46
RPUSD3Q6P087 MIR3163-201ENST00000581592 73 ntBASIC-0.33□□□□□ -2.46
RPUSD3Q6P087 MIR548AZ-201ENST00000616567 95 ntBASIC-0.33□□□□□ -2.46
RPUSD3Q6P087 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.34□□□□□ -2.46
RPUSD3Q6P087 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.34□□□□□ -2.46
RPUSD3Q6P087 SNORA32.3-201ENST00000384772 121 ntBASIC-0.34□□□□□ -2.46
RPUSD3Q6P087 SNORD75.1-201ENST00000408373 60 ntBASIC-0.34□□□□□ -2.46
RPUSD3Q6P087 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.34□□□□□ -2.46
RPUSD3Q6P087 MIR4493-201ENST00000584016 73 ntBASIC-0.34□□□□□ -2.46
RPUSD3Q6P087 MIR376B-201ENST00000614515 100 ntBASIC-0.34□□□□□ -2.46
RPUSD3Q6P087 FTX_2.1-201ENST00000618816 94 ntBASIC-0.34□□□□□ -2.46
RPUSD3Q6P087 uc_338.36-201ENST00000622331 158 ntBASIC-0.34□□□□□ -2.46
RPUSD3Q6P087 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.35□□□□□ -2.47
RPUSD3Q6P087 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.35□□□□□ -2.47
RPUSD3Q6P087 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.35□□□□□ -2.47
RPUSD3Q6P087 RNA5SP25-201ENST00000410815 110 ntBASIC-0.35□□□□□ -2.47
RPUSD3Q6P087 RNU7-195P-201ENST00000458793 62 ntBASIC-0.35□□□□□ -2.47
RPUSD3Q6P087 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.35□□□□□ -2.47
RPUSD3Q6P087 RNU7-6P-201ENST00000516845 62 ntBASIC-0.35□□□□□ -2.47
RPUSD3Q6P087 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.35□□□□□ -2.47
RPUSD3Q6P087 AC084368.1-201ENST00000620935 65 ntBASIC-0.35□□□□□ -2.47
RPUSD3Q6P087 MIR4788-201ENST00000639104 80 ntBASIC-0.35□□□□□ -2.47
RPUSD3Q6P087 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.36□□□□□ -2.47
RPUSD3Q6P087 SNORD115-44-201ENST00000365391 82 ntBASIC-0.36□□□□□ -2.47
RPUSD3Q6P087 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.36□□□□□ -2.47
RPUSD3Q6P087 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
RPUSD3Q6P087 RNU6-735P-201ENST00000410612 107 ntBASIC-0.36□□□□□ -2.47
RPUSD3Q6P087 RNU7-120P-201ENST00000459334 63 ntBASIC-0.36□□□□□ -2.47
RPUSD3Q6P087 RNU6-758P-201ENST00000516292 89 ntBASIC-0.36□□□□□ -2.47
RPUSD3Q6P087 RNU6-175P-201ENST00000516896 107 ntBASIC-0.36□□□□□ -2.47
RPUSD3Q6P087 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.36□□□□□ -2.47
RPUSD3Q6P087 NAMPTP3-201ENST00000569273 224 ntBASIC-0.36□□□□□ -2.47
RPUSD3Q6P087 AC145423.2-201ENST00000610631 239 ntBASIC-0.36□□□□□ -2.47
RPUSD3Q6P087 SNORD114-28-201ENST00000363610 72 ntBASIC-0.37□□□□□ -2.47
RPUSD3Q6P087 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.37□□□□□ -2.47
RPUSD3Q6P087 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.37□□□□□ -2.47
RPUSD3Q6P087 U8.6-201ENST00000364939 135 ntBASIC-0.37□□□□□ -2.47
RPUSD3Q6P087 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.37□□□□□ -2.47
RPUSD3Q6P087 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.37□□□□□ -2.47
RPUSD3Q6P087 RNA5SP484-201ENST00000458857 111 ntBASIC-0.37□□□□□ -2.47
RPUSD3Q6P087 AC114755.3-201ENST00000481111 251 ntBASIC-0.37□□□□□ -2.47
RPUSD3Q6P087 MIR3920-201ENST00000581751 86 ntBASIC-0.37□□□□□ -2.47
RPUSD3Q6P087 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.38□□□□□ -2.47
RPUSD3Q6P087 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.38□□□□□ -2.47
RPUSD3Q6P087 RNU6-524P-201ENST00000384270 107 ntBASIC-0.38□□□□□ -2.47
RPUSD3Q6P087 RNU6-480P-201ENST00000384332 107 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 267.8 ms