Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AC023934.1-201ENST00000574529 2389 ntBASIC1.29□□□□□ -2.2
CLK3P49761 MIR101-2-201ENST00000362195 79 ntBASIC1.29□□□□□ -2.2
CLK3P49761 RNU6-478P-201ENST00000363904 110 ntBASIC1.29□□□□□ -2.2
CLK3P49761 RNA5SP99-201ENST00000364020 114 ntBASIC1.29□□□□□ -2.2
CLK3P49761 SNORD113.3-201ENST00000364630 78 ntBASIC1.29□□□□□ -2.2
CLK3P49761 MIR635-201ENST00000384830 98 ntBASIC1.29□□□□□ -2.2
CLK3P49761 MIR519A1-201ENST00000385257 85 ntBASIC1.29□□□□□ -2.2
CLK3P49761 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.29□□□□□ -2.2
CLK3P49761 AC048334.1-201ENST00000477975 159 ntBASIC1.29□□□□□ -2.2
CLK3P49761 RNU6-75P-201ENST00000515944 104 ntBASIC1.29□□□□□ -2.2
CLK3P49761 SNORD92-201ENST00000585078 85 ntBASIC1.29□□□□□ -2.2
CLK3P49761 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
CLK3P49761 RNU6-1094P-201ENST00000362416 104 ntBASIC1.28□□□□□ -2.2
CLK3P49761 MIR548U-201ENST00000390728 81 ntBASIC1.28□□□□□ -2.2
CLK3P49761 AC073261.1-201ENST00000429409 121 ntBASIC1.28□□□□□ -2.2
CLK3P49761 AL450471.1-201ENST00000447509 127 ntBASIC1.28□□□□□ -2.2
CLK3P49761 MIR3064-201ENST00000581130 66 ntBASIC1.28□□□□□ -2.2
CLK3P49761 MIR4303-201ENST00000581299 66 ntBASIC1.28□□□□□ -2.2
CLK3P49761 AC104996.3-201ENST00000590718 94 ntBASIC1.28□□□□□ -2.2
CLK3P49761 AC013244.2-201ENST00000603396 103 ntBASIC1.28□□□□□ -2.2
CLK3P49761 AC145423.2-201ENST00000610631 239 ntBASIC1.28□□□□□ -2.2
CLK3P49761 MIR6082-201ENST00000613604 109 ntBASIC1.28□□□□□ -2.2
CLK3P49761 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
CLK3P49761 SNORA63.2-201ENST00000362603 126 ntBASIC1.27□□□□□ -2.21
CLK3P49761 Y_RNA.56-201ENST00000362798 112 ntBASIC1.27□□□□□ -2.21
CLK3P49761 Y_RNA.536-201ENST00000384621 113 ntBASIC1.27□□□□□ -2.21
CLK3P49761 RNA5SP292-201ENST00000390974 118 ntBASIC1.27□□□□□ -2.21
CLK3P49761 snoU13.21-201ENST00000459368 105 ntBASIC1.27□□□□□ -2.21
CLK3P49761 TRAJ51-201ENST00000504127 63 ntBASIC1.27□□□□□ -2.21
CLK3P49761 Y_RNA.660-201ENST00000516002 120 ntBASIC1.27□□□□□ -2.21
CLK3P49761 SNORA18.5-201ENST00000516616 101 ntBASIC1.27□□□□□ -2.21
CLK3P49761 RNU6-765P-201ENST00000516916 99 ntBASIC1.27□□□□□ -2.21
CLK3P49761 AC036111.3-201ENST00000526389 112 ntBASIC1.27□□□□□ -2.21
CLK3P49761 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CLK3P49761 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
CLK3P49761 Y_RNA.13-201ENST00000362403 112 ntBASIC1.26□□□□□ -2.21
CLK3P49761 RNU6-957P-201ENST00000363652 99 ntBASIC1.26□□□□□ -2.21
CLK3P49761 RNU6-1229P-201ENST00000364295 107 ntBASIC1.26□□□□□ -2.21
CLK3P49761 RNU6-686P-201ENST00000364839 107 ntBASIC1.26□□□□□ -2.21
CLK3P49761 RNU6-934P-201ENST00000365154 107 ntBASIC1.26□□□□□ -2.21
CLK3P49761 Y_RNA.330-201ENST00000365230 109 ntBASIC1.26□□□□□ -2.21
CLK3P49761 RNU6-132P-201ENST00000383863 107 ntBASIC1.26□□□□□ -2.21
CLK3P49761 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
CLK3P49761 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.26□□□□□ -2.21
CLK3P49761 SNORD111-201ENST00000408139 94 ntBASIC1.26□□□□□ -2.21
CLK3P49761 RNU6-380P-201ENST00000410207 107 ntBASIC1.26□□□□□ -2.21
CLK3P49761 SNORD83.1-201ENST00000411362 77 ntBASIC1.26□□□□□ -2.21
CLK3P49761 FGF7P7-201ENST00000514120 227 ntBASIC1.26□□□□□ -2.21
CLK3P49761 SNORA70.22-201ENST00000517160 124 ntBASIC1.26□□□□□ -2.21
CLK3P49761 U7.4-201ENST00000614961 63 ntBASIC1.26□□□□□ -2.21
CLK3P49761 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CLK3P49761 MIRLET7A1-201ENST00000362295 80 ntBASIC1.25□□□□□ -2.21
CLK3P49761 Y_RNA.491-201ENST00000384417 107 ntBASIC1.25□□□□□ -2.21
CLK3P49761 MIR125B2-201ENST00000385128 89 ntBASIC1.25□□□□□ -2.21
CLK3P49761 RNU6-910P-201ENST00000390844 107 ntBASIC1.25□□□□□ -2.21
CLK3P49761 AC108667.1-201ENST00000428618 249 ntBASIC1.25□□□□□ -2.21
CLK3P49761 RNU7-195P-201ENST00000458793 62 ntBASIC1.25□□□□□ -2.21
CLK3P49761 RNA5SP458-201ENST00000516188 119 ntBASIC1.25□□□□□ -2.21
CLK3P49761 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.25□□□□□ -2.21
CLK3P49761 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CLK3P49761 MIR378A-201ENST00000362177 66 ntBASIC1.24□□□□□ -2.21
CLK3P49761 Y_RNA.42-201ENST00000362660 108 ntBASIC1.24□□□□□ -2.21
CLK3P49761 RNU6-1260P-201ENST00000362944 107 ntBASIC1.24□□□□□ -2.21
CLK3P49761 SNORA25.9-201ENST00000365087 128 ntBASIC1.24□□□□□ -2.21
CLK3P49761 MIR518E-201ENST00000385252 88 ntBASIC1.24□□□□□ -2.21
CLK3P49761 SNORA75.2-201ENST00000391138 150 ntBASIC1.24□□□□□ -2.21
CLK3P49761 SNORA75.3-201ENST00000391231 150 ntBASIC1.24□□□□□ -2.21
CLK3P49761 MIR889-201ENST00000401280 79 ntBASIC1.24□□□□□ -2.21
CLK3P49761 RNU4-62P-201ENST00000410125 130 ntBASIC1.24□□□□□ -2.21
CLK3P49761 AC092628.1-201ENST00000436250 252 ntBASIC1.24□□□□□ -2.21
CLK3P49761 Y_RNA.809-201ENST00000516058 95 ntBASIC1.24□□□□□ -2.21
CLK3P49761 MIR4421-201ENST00000578133 69 ntBASIC1.24□□□□□ -2.21
CLK3P49761 MIR4769-201ENST00000584126 77 ntBASIC1.24□□□□□ -2.21
CLK3P49761 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.24□□□□□ -2.21
CLK3P49761 AC106800.4-201ENST00000614905 153 ntBASIC1.24□□□□□ -2.21
CLK3P49761 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CLK3P49761 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.23□□□□□ -2.21
CLK3P49761 SNORA7.1-201ENST00000363750 139 ntBASIC1.23□□□□□ -2.21
CLK3P49761 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
CLK3P49761 MIR222-201ENST00000384992 110 ntBASIC1.23□□□□□ -2.21
CLK3P49761 SNORA17.3-201ENST00000391159 129 ntBASIC1.23□□□□□ -2.21
CLK3P49761 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
CLK3P49761 MIR4771-2-201ENST00000577758 74 ntBASIC1.23□□□□□ -2.21
CLK3P49761 MIR4771-1-201ENST00000582617 74 ntBASIC1.23□□□□□ -2.21
CLK3P49761 MIRLET7F1-201ENST00000362202 87 ntBASIC1.22□□□□□ -2.21
CLK3P49761 RNU6-161P-201ENST00000363051 106 ntBASIC1.22□□□□□ -2.21
CLK3P49761 Y_RNA.264-201ENST00000364665 102 ntBASIC1.22□□□□□ -2.21
CLK3P49761 SNORA25.8-201ENST00000364831 128 ntBASIC1.22□□□□□ -2.21
CLK3P49761 Y_RNA.363-201ENST00000365529 113 ntBASIC1.22□□□□□ -2.21
CLK3P49761 SNORA80D-201ENST00000384488 135 ntBASIC1.22□□□□□ -2.21
CLK3P49761 RPS26P5-201ENST00000418544 335 ntBASIC1.22□□□□□ -2.21
CLK3P49761 AC097635.1-201ENST00000450678 155 ntBASIC1.22□□□□□ -2.21
CLK3P49761 RNU6-237P-201ENST00000515985 71 ntBASIC1.22□□□□□ -2.21
CLK3P49761 RNU7-156P-201ENST00000517214 74 ntBASIC1.22□□□□□ -2.21
CLK3P49761 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.22□□□□□ -2.21
CLK3P49761 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
CLK3P49761 Y_RNA.545-201ENST00000384652 105 ntBASIC1.21□□□□□ -2.22
CLK3P49761 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CLK3P49761 SNORD77.2-201ENST00000391045 68 ntBASIC1.21□□□□□ -2.22
CLK3P49761 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 226.4 ms