Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AP001180.6-201ENST00000584918 159 ntBASIC-0.29□□□□□ -2.46
BDNFP23560 AC072026.1-201ENST00000605023 201 ntBASIC-0.29□□□□□ -2.46
BDNFP23560 RNY1P11-201ENST00000363759 113 ntBASIC-0.3□□□□□ -2.46
BDNFP23560 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.3□□□□□ -2.46
BDNFP23560 SNORD114-12-201ENST00000365400 75 ntBASIC-0.3□□□□□ -2.46
BDNFP23560 RNU6-524P-201ENST00000384270 107 ntBASIC-0.3□□□□□ -2.46
BDNFP23560 AC109327.2-201ENST00000448339 378 ntBASIC-0.3□□□□□ -2.46
BDNFP23560 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.3□□□□□ -2.46
BDNFP23560 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.3□□□□□ -2.46
BDNFP23560 AC022559.1-201ENST00000520905 205 ntBASIC-0.3□□□□□ -2.46
BDNFP23560 MTND5P40-201ENST00000559945 246 ntBASIC-0.3□□□□□ -2.46
BDNFP23560 MIR3658-201ENST00000636291 56 ntBASIC-0.3□□□□□ -2.46
BDNFP23560 RNU6-694P-201ENST00000364071 147 ntBASIC-0.31□□□□□ -2.46
BDNFP23560 RNU1-141P-201ENST00000364623 158 ntBASIC-0.31□□□□□ -2.46
BDNFP23560 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.31□□□□□ -2.46
BDNFP23560 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.31□□□□□ -2.46
BDNFP23560 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.31□□□□□ -2.46
BDNFP23560 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.31□□□□□ -2.46
BDNFP23560 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.32□□□□□ -2.46
BDNFP23560 MIR516B1-201ENST00000385211 90 ntBASIC-0.32□□□□□ -2.46
BDNFP23560 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.32□□□□□ -2.46
BDNFP23560 RNU7-106P-201ENST00000459514 67 ntBASIC-0.32□□□□□ -2.46
BDNFP23560 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.32□□□□□ -2.46
BDNFP23560 RNU6-850P-201ENST00000516934 103 ntBASIC-0.32□□□□□ -2.46
BDNFP23560 AC130289.1-201ENST00000577321 73 ntBASIC-0.32□□□□□ -2.46
BDNFP23560 MIR4503-201ENST00000582187 83 ntBASIC-0.32□□□□□ -2.46
BDNFP23560 MIR4493-201ENST00000584016 73 ntBASIC-0.32□□□□□ -2.46
BDNFP23560 AC108081.1-201ENST00000604358 221 ntBASIC-0.32□□□□□ -2.46
BDNFP23560 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.33□□□□□ -2.46
BDNFP23560 SNORD114-28-201ENST00000363610 72 ntBASIC-0.33□□□□□ -2.46
BDNFP23560 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.33□□□□□ -2.46
BDNFP23560 SNORD115-44-201ENST00000365391 82 ntBASIC-0.33□□□□□ -2.46
BDNFP23560 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.33□□□□□ -2.46
BDNFP23560 MIR34C-201ENST00000384831 77 ntBASIC-0.33□□□□□ -2.46
BDNFP23560 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.33□□□□□ -2.46
BDNFP23560 HAR1A.1-201ENST00000459583 118 ntBASIC-0.33□□□□□ -2.46
BDNFP23560 RNU6-758P-201ENST00000516292 89 ntBASIC-0.33□□□□□ -2.46
BDNFP23560 MIR3666-201ENST00000607845 111 ntBASIC-0.33□□□□□ -2.46
BDNFP23560 AC087741.2-201ENST00000619415 172 ntBASIC-0.33□□□□□ -2.46
BDNFP23560 SNORD115-19-201ENST00000363098 82 ntBASIC-0.34□□□□□ -2.46
BDNFP23560 SNORD115-18-201ENST00000363293 82 ntBASIC-0.34□□□□□ -2.46
BDNFP23560 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.34□□□□□ -2.46
BDNFP23560 SNORD115-17-201ENST00000364612 82 ntBASIC-0.34□□□□□ -2.46
BDNFP23560 RNU6-196P-201ENST00000384315 107 ntBASIC-0.34□□□□□ -2.46
BDNFP23560 SNORD38.2-201ENST00000384470 69 ntBASIC-0.34□□□□□ -2.46
BDNFP23560 MIR617-201ENST00000385030 97 ntBASIC-0.34□□□□□ -2.46
BDNFP23560 MTND3P2-201ENST00000438452 342 ntBASIC-0.34□□□□□ -2.46
BDNFP23560 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.34□□□□□ -2.46
BDNFP23560 RNU7-6P-201ENST00000516845 62 ntBASIC-0.34□□□□□ -2.46
BDNFP23560 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.34□□□□□ -2.46
BDNFP23560 AL670379.3-201ENST00000605040 251 ntBASIC-0.34□□□□□ -2.46
BDNFP23560 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.35□□□□□ -2.47
BDNFP23560 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.35□□□□□ -2.47
BDNFP23560 MIR106A-201ENST00000384870 81 ntBASIC-0.35□□□□□ -2.47
BDNFP23560 MIR519E-201ENST00000385075 84 ntBASIC-0.35□□□□□ -2.47
BDNFP23560 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.35□□□□□ -2.47
BDNFP23560 MIR3121-201ENST00000579680 77 ntBASIC-0.35□□□□□ -2.47
BDNFP23560 MIR3163-201ENST00000581592 73 ntBASIC-0.35□□□□□ -2.47
BDNFP23560 AC069503.3-201ENST00000618674 145 ntBASIC-0.35□□□□□ -2.47
BDNFP23560 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.35□□□□□ -2.47
BDNFP23560 SNORD49B-201ENST00000365172 72 ntBASIC-0.36□□□□□ -2.47
BDNFP23560 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.36□□□□□ -2.47
BDNFP23560 MIR604-201ENST00000384880 94 ntBASIC-0.36□□□□□ -2.47
BDNFP23560 MIR516A2-201ENST00000384888 90 ntBASIC-0.36□□□□□ -2.47
BDNFP23560 MIR516A1-201ENST00000385033 90 ntBASIC-0.36□□□□□ -2.47
BDNFP23560 RNA5SP25-201ENST00000410815 110 ntBASIC-0.36□□□□□ -2.47
BDNFP23560 AC093423.1-201ENST00000440817 142 ntBASIC-0.36□□□□□ -2.47
BDNFP23560 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.36□□□□□ -2.47
BDNFP23560 RNU6-521P-201ENST00000516663 105 ntBASIC-0.36□□□□□ -2.47
BDNFP23560 AP002392.1-201ENST00000537692 208 ntBASIC-0.36□□□□□ -2.47
BDNFP23560 MIR548AG2-201ENST00000581228 64 ntBASIC-0.36□□□□□ -2.47
BDNFP23560 uc_338.10-201ENST00000621872 182 ntBASIC-0.36□□□□□ -2.47
BDNFP23560 MIR101-1-201ENST00000362265 75 ntBASIC-0.37□□□□□ -2.47
BDNFP23560 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.37□□□□□ -2.47
BDNFP23560 RNA5SP300-201ENST00000391197 107 ntBASIC-0.37□□□□□ -2.47
BDNFP23560 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.37□□□□□ -2.47
BDNFP23560 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.37□□□□□ -2.47
BDNFP23560 MIR181B2-201ENST00000385004 89 ntBASIC-0.38□□□□□ -2.47
BDNFP23560 MT-TI-201ENST00000387365 69 ntBASIC-0.38□□□□□ -2.47
BDNFP23560 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.38□□□□□ -2.47
BDNFP23560 MIR4263-201ENST00000584745 83 ntBASIC-0.38□□□□□ -2.47
BDNFP23560 RN7SL660P-201ENST00000614852 299 ntBASIC-0.38□□□□□ -2.47
BDNFP23560 AC141273.2-201ENST00000618989 130 ntBASIC-0.38□□□□□ -2.47
BDNFP23560 AC021753.1-201ENST00000635724 168 ntBASIC-0.38□□□□□ -2.47
BDNFP23560 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.39□□□□□ -2.47
BDNFP23560 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.39□□□□□ -2.47
BDNFP23560 RNU4-11P-201ENST00000365287 132 ntBASIC-0.39□□□□□ -2.47
BDNFP23560 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.39□□□□□ -2.47
BDNFP23560 MIR759-201ENST00000390224 91 ntBASIC-0.39□□□□□ -2.47
BDNFP23560 RNU7-197P-201ENST00000458836 62 ntBASIC-0.39□□□□□ -2.47
BDNFP23560 RNU7-120P-201ENST00000459334 63 ntBASIC-0.39□□□□□ -2.47
BDNFP23560 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.39□□□□□ -2.47
BDNFP23560 IGKV1-22-201ENST00000524313 326 ntBASIC-0.39□□□□□ -2.47
BDNFP23560 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.39□□□□□ -2.47
BDNFP23560 YWHAEP2-201ENST00000580066 112 ntBASIC-0.39□□□□□ -2.47
BDNFP23560 MIR4473-201ENST00000583731 91 ntBASIC-0.39□□□□□ -2.47
BDNFP23560 MIR8064-201ENST00000612863 90 ntBASIC-0.39□□□□□ -2.47
BDNFP23560 AL162726.3-218ENST00000636401 95 ntBASIC-0.39□□□□□ -2.47
BDNFP23560 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.4□□□□□ -2.47
BDNFP23560 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms