Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 MT-TI-201ENST00000387365 69 ntBASIC0.17□□□□□ -2.38
MMP1P03956 RNU2-59P-201ENST00000410482 191 ntBASIC0.17□□□□□ -2.38
MMP1P03956 MIR3121-201ENST00000579680 77 ntBASIC0.17□□□□□ -2.38
MMP1P03956 AL137067.1-201ENST00000615933 120 ntBASIC0.17□□□□□ -2.38
MMP1P03956 TUG1_4.1-201ENST00000619464 181 ntBASIC0.17□□□□□ -2.38
MMP1P03956 Y_RNA.778-201ENST00000620203 90 ntBASIC0.17□□□□□ -2.38
MMP1P03956 Y_RNA.56-201ENST00000362798 112 ntBASIC0.16□□□□□ -2.38
MMP1P03956 Y_RNA.299-201ENST00000364973 94 ntBASIC0.16□□□□□ -2.38
MMP1P03956 RNU6-187P-201ENST00000384139 106 ntBASIC0.16□□□□□ -2.38
MMP1P03956 MIRLET7F2-201ENST00000385277 83 ntBASIC0.16□□□□□ -2.38
MMP1P03956 AC108059.2-201ENST00000434626 151 ntBASIC0.16□□□□□ -2.38
MMP1P03956 RNU6-1229P-201ENST00000364295 107 ntBASIC0.15□□□□□ -2.39
MMP1P03956 Y_RNA.294-201ENST00000364916 102 ntBASIC0.15□□□□□ -2.39
MMP1P03956 RNU6-449P-201ENST00000383914 107 ntBASIC0.15□□□□□ -2.39
MMP1P03956 RNU6-804P-201ENST00000384286 107 ntBASIC0.15□□□□□ -2.39
MMP1P03956 RNU6-429P-201ENST00000384582 108 ntBASIC0.15□□□□□ -2.39
MMP1P03956 AC244505.6-201ENST00000452829 130 ntBASIC0.15□□□□□ -2.39
MMP1P03956 HAR1A.1-201ENST00000459583 118 ntBASIC0.15□□□□□ -2.39
MMP1P03956 RNA5SP227-201ENST00000516184 113 ntBASIC0.15□□□□□ -2.39
MMP1P03956 RNU1-29P-201ENST00000606574 126 ntBASIC0.15□□□□□ -2.39
MMP1P03956 AC091304.10-201ENST00000641554 121 ntBASIC0.15□□□□□ -2.39
MMP1P03956 RNU6-915P-201ENST00000364943 103 ntBASIC0.14□□□□□ -2.39
MMP1P03956 SNORD116-18-201ENST00000383961 92 ntBASIC0.14□□□□□ -2.39
MMP1P03956 RNU6-1126P-201ENST00000384002 107 ntBASIC0.14□□□□□ -2.39
MMP1P03956 Y_RNA.448-201ENST00000384185 108 ntBASIC0.14□□□□□ -2.39
MMP1P03956 RNU6-616P-201ENST00000384353 107 ntBASIC0.14□□□□□ -2.39
MMP1P03956 AC073261.1-201ENST00000429409 121 ntBASIC0.14□□□□□ -2.39
MMP1P03956 RNU7-48P-201ENST00000458875 63 ntBASIC0.14□□□□□ -2.39
MMP1P03956 RNU5E-3P-201ENST00000515913 68 ntBASIC0.14□□□□□ -2.39
MMP1P03956 AC069113.3-201ENST00000521019 150 ntBASIC0.14□□□□□ -2.39
MMP1P03956 FTX_2.1-201ENST00000618816 94 ntBASIC0.14□□□□□ -2.39
MMP1P03956 MIR101-2-201ENST00000362195 79 ntBASIC0.13□□□□□ -2.39
MMP1P03956 Y_RNA.49-201ENST00000362714 112 ntBASIC0.13□□□□□ -2.39
MMP1P03956 RNU7-2P-201ENST00000516096 62 ntBASIC0.13□□□□□ -2.39
MMP1P03956 RNU7-161P-201ENST00000517289 62 ntBASIC0.13□□□□□ -2.39
MMP1P03956 MIR3144-201ENST00000579460 79 ntBASIC0.13□□□□□ -2.39
MMP1P03956 AC087741.2-201ENST00000619415 172 ntBASIC0.13□□□□□ -2.39
MMP1P03956 Y_RNA.127-201ENST00000363386 109 ntBASIC0.12□□□□□ -2.39
MMP1P03956 SNORD115-24-201ENST00000363528 82 ntBASIC0.12□□□□□ -2.39
MMP1P03956 RNU6-726P-201ENST00000364680 107 ntBASIC0.12□□□□□ -2.39
MMP1P03956 Y_RNA.398-201ENST00000383952 99 ntBASIC0.12□□□□□ -2.39
MMP1P03956 RNU6-886P-201ENST00000384319 105 ntBASIC0.12□□□□□ -2.39
MMP1P03956 TRAJ51-201ENST00000504127 63 ntBASIC0.12□□□□□ -2.39
MMP1P03956 MIR4752-201ENST00000579672 72 ntBASIC0.12□□□□□ -2.39
MMP1P03956 MIR6086-201ENST00000638065 55 ntBASIC0.12□□□□□ -2.39
MMP1P03956 Y_RNA.114-201ENST00000363265 113 ntBASIC0.11□□□□□ -2.39
MMP1P03956 Y_RNA.150-201ENST00000363562 102 ntBASIC0.11□□□□□ -2.39
MMP1P03956 RNA5SP403-201ENST00000363598 108 ntBASIC0.11□□□□□ -2.39
MMP1P03956 SNORD115-35-201ENST00000365122 82 ntBASIC0.11□□□□□ -2.39
MMP1P03956 Y_RNA.423-201ENST00000384057 113 ntBASIC0.11□□□□□ -2.39
MMP1P03956 MIR569-201ENST00000385228 96 ntBASIC0.11□□□□□ -2.39
MMP1P03956 SNORD77B-201ENST00000391112 67 ntBASIC0.11□□□□□ -2.39
MMP1P03956 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
MMP1P03956 RNU6-182P-201ENST00000516970 105 ntBASIC0.11□□□□□ -2.39
MMP1P03956 MTND5P41-201ENST00000517498 206 ntBASIC0.11□□□□□ -2.39
MMP1P03956 AC138869.1-201ENST00000568623 124 ntBASIC0.11□□□□□ -2.39
MMP1P03956 MIR4500-201ENST00000579472 76 ntBASIC0.11□□□□□ -2.39
MMP1P03956 MIR548H5-201ENST00000580314 60 ntBASIC0.11□□□□□ -2.39
MMP1P03956 Y_RNA.773-201ENST00000607168 90 ntBASIC0.11□□□□□ -2.39
MMP1P03956 MIR376B-201ENST00000614515 100 ntBASIC0.11□□□□□ -2.39
MMP1P03956 AP001340.1-201ENST00000624405 217 ntBASIC0.11□□□□□ -2.39
MMP1P03956 Y_RNA.8-201ENST00000362353 102 ntBASIC0.1□□□□□ -2.39
MMP1P03956 Y_RNA.98-201ENST00000363109 102 ntBASIC0.1□□□□□ -2.39
MMP1P03956 Y_RNA.328-201ENST00000365208 113 ntBASIC0.1□□□□□ -2.39
MMP1P03956 Y_RNA.420-201ENST00000384043 110 ntBASIC0.1□□□□□ -2.39
MMP1P03956 BX276092.1-201ENST00000427368 251 ntBASIC0.1□□□□□ -2.39
MMP1P03956 RNU6-1232P-201ENST00000516299 86 ntBASIC0.1□□□□□ -2.39
MMP1P03956 Y_RNA.692-201ENST00000516627 105 ntBASIC0.1□□□□□ -2.39
MMP1P03956 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
MMP1P03956 AL162376.1-201ENST00000624117 175 ntBASIC0.1□□□□□ -2.39
MMP1P03956 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
MMP1P03956 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
MMP1P03956 SNORD115-19-201ENST00000363098 82 ntBASIC0.09□□□□□ -2.4
MMP1P03956 SNORD115-18-201ENST00000363293 82 ntBASIC0.09□□□□□ -2.4
MMP1P03956 RNU6-1099P-201ENST00000363533 107 ntBASIC0.09□□□□□ -2.4
MMP1P03956 Y_RNA.215-201ENST00000364204 112 ntBASIC0.09□□□□□ -2.4
MMP1P03956 SNORD115-17-201ENST00000364612 82 ntBASIC0.09□□□□□ -2.4
MMP1P03956 Y_RNA.400-201ENST00000383963 111 ntBASIC0.09□□□□□ -2.4
MMP1P03956 MIR513C-201ENST00000401352 84 ntBASIC0.09□□□□□ -2.4
MMP1P03956 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.09□□□□□ -2.4
MMP1P03956 RNU6-735P-201ENST00000410612 107 ntBASIC0.09□□□□□ -2.4
MMP1P03956 RN7SKP19-201ENST00000516016 252 ntBASIC0.09□□□□□ -2.4
MMP1P03956 RNU7-6P-201ENST00000516845 62 ntBASIC0.09□□□□□ -2.4
MMP1P03956 AP001328.1-201ENST00000528550 176 ntBASIC0.09□□□□□ -2.4
MMP1P03956 MIR548X2-201ENST00000579776 100 ntBASIC0.09□□□□□ -2.4
MMP1P03956 AP001362.1-201ENST00000625165 124 ntBASIC0.09□□□□□ -2.4
MMP1P03956 AC021753.1-201ENST00000635724 168 ntBASIC0.09□□□□□ -2.4
MMP1P03956 SNORA42.1-201ENST00000363515 137 ntBASIC0.08□□□□□ -2.4
MMP1P03956 MIR34C-201ENST00000384831 77 ntBASIC0.08□□□□□ -2.4
MMP1P03956 RNU6-848P-201ENST00000515948 107 ntBASIC0.08□□□□□ -2.4
MMP1P03956 RNA5SP272-201ENST00000516095 111 ntBASIC0.08□□□□□ -2.4
MMP1P03956 RNU6-617P-201ENST00000516147 107 ntBASIC0.08□□□□□ -2.4
MMP1P03956 RNU6-473P-201ENST00000516164 107 ntBASIC0.08□□□□□ -2.4
MMP1P03956 RNU6-1049P-201ENST00000516414 107 ntBASIC0.08□□□□□ -2.4
MMP1P03956 SNORA2A-201ENST00000383885 135 ntBASIC0.07□□□□□ -2.4
MMP1P03956 MIR635-201ENST00000384830 98 ntBASIC0.07□□□□□ -2.4
MMP1P03956 MIR760-201ENST00000390220 80 ntBASIC0.07□□□□□ -2.4
MMP1P03956 MIR1912-201ENST00000410389 80 ntBASIC0.07□□□□□ -2.4
MMP1P03956 RNU7-104P-201ENST00000459398 79 ntBASIC0.07□□□□□ -2.4
MMP1P03956 RNU6-781P-201ENST00000516377 101 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 242.1 ms