Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RNU6-1194P-201ENST00000516208 104 ntBASIC0.58□□□□□ -2.32
LRCH1Q9Y2L9 SNORA31.14-201ENST00000516728 116 ntBASIC0.58□□□□□ -2.32
LRCH1Q9Y2L9 RNA5SP517-201ENST00000364724 117 ntBASIC0.57□□□□□ -2.32
LRCH1Q9Y2L9 Y_RNA.464-201ENST00000384282 110 ntBASIC0.57□□□□□ -2.32
LRCH1Q9Y2L9 IGKV1-22-201ENST00000524313 326 ntBASIC0.57□□□□□ -2.32
LRCH1Q9Y2L9 MIR4714-201ENST00000580728 77 ntBASIC0.57□□□□□ -2.32
LRCH1Q9Y2L9 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
LRCH1Q9Y2L9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
LRCH1Q9Y2L9 Y_RNA.119-201ENST00000363301 96 ntBASIC0.56□□□□□ -2.32
LRCH1Q9Y2L9 Y_RNA.567-201ENST00000384736 106 ntBASIC0.56□□□□□ -2.32
LRCH1Q9Y2L9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.56□□□□□ -2.32
LRCH1Q9Y2L9 Y_RNA.170-201ENST00000363746 110 ntBASIC0.55□□□□□ -2.32
LRCH1Q9Y2L9 RNU6-647P-201ENST00000364243 107 ntBASIC0.55□□□□□ -2.32
LRCH1Q9Y2L9 Y_RNA.294-201ENST00000364916 102 ntBASIC0.55□□□□□ -2.32
LRCH1Q9Y2L9 Y_RNA.488-201ENST00000384403 102 ntBASIC0.55□□□□□ -2.32
LRCH1Q9Y2L9 MIR6515-201ENST00000619843 57 ntBASIC0.55□□□□□ -2.32
LRCH1Q9Y2L9 SNORD18A-201ENST00000363753 72 ntBASIC0.54□□□□□ -2.32
LRCH1Q9Y2L9 RNY1P2-201ENST00000364820 117 ntBASIC0.54□□□□□ -2.32
LRCH1Q9Y2L9 MIR206-201ENST00000384872 86 ntBASIC0.54□□□□□ -2.32
LRCH1Q9Y2L9 SNORA68.3-201ENST00000515906 83 ntBASIC0.54□□□□□ -2.32
LRCH1Q9Y2L9 RN7SKP19-201ENST00000516016 252 ntBASIC0.54□□□□□ -2.32
LRCH1Q9Y2L9 U7.2-201ENST00000607576 63 ntBASIC0.54□□□□□ -2.32
LRCH1Q9Y2L9 MIR101-2-201ENST00000362195 79 ntBASIC0.53□□□□□ -2.32
LRCH1Q9Y2L9 RNU6-1321P-201ENST00000390905 107 ntBASIC0.53□□□□□ -2.32
LRCH1Q9Y2L9 SNORA40.8-201ENST00000411034 126 ntBASIC0.53□□□□□ -2.32
LRCH1Q9Y2L9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.53□□□□□ -2.32
LRCH1Q9Y2L9 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
LRCH1Q9Y2L9 RNA5SP272-201ENST00000516095 111 ntBASIC0.53□□□□□ -2.32
LRCH1Q9Y2L9 RNU7-200P-201ENST00000516105 62 ntBASIC0.53□□□□□ -2.32
LRCH1Q9Y2L9 RNU6-135P-201ENST00000516769 101 ntBASIC0.53□□□□□ -2.32
LRCH1Q9Y2L9 RNU6-1212P-201ENST00000517023 104 ntBASIC0.53□□□□□ -2.32
LRCH1Q9Y2L9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
LRCH1Q9Y2L9 Y_RNA.448-201ENST00000384185 108 ntBASIC0.52□□□□□ -2.33
LRCH1Q9Y2L9 SNORA8.2-201ENST00000384372 139 ntBASIC0.52□□□□□ -2.33
LRCH1Q9Y2L9 MIR489-201ENST00000384923 84 ntBASIC0.52□□□□□ -2.33
LRCH1Q9Y2L9 SNORD71-201ENST00000411292 86 ntBASIC0.52□□□□□ -2.33
LRCH1Q9Y2L9 RNU6-426P-201ENST00000516464 97 ntBASIC0.52□□□□□ -2.33
LRCH1Q9Y2L9 MIR3668-201ENST00000582138 75 ntBASIC0.52□□□□□ -2.33
LRCH1Q9Y2L9 SNORA25.18-201ENST00000607153 114 ntBASIC0.52□□□□□ -2.33
LRCH1Q9Y2L9 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
LRCH1Q9Y2L9 SNORA36.1-201ENST00000363424 132 ntBASIC0.51□□□□□ -2.33
LRCH1Q9Y2L9 Y_RNA.280-201ENST00000364765 112 ntBASIC0.51□□□□□ -2.33
LRCH1Q9Y2L9 RNU6-616P-201ENST00000384353 107 ntBASIC0.51□□□□□ -2.33
LRCH1Q9Y2L9 MIR518A1-201ENST00000385068 85 ntBASIC0.51□□□□□ -2.33
LRCH1Q9Y2L9 MIRLET7F2-201ENST00000385277 83 ntBASIC0.51□□□□□ -2.33
LRCH1Q9Y2L9 RNU7-6P-201ENST00000516845 62 ntBASIC0.51□□□□□ -2.33
LRCH1Q9Y2L9 RNU6-429P-201ENST00000384582 108 ntBASIC0.5□□□□□ -2.33
LRCH1Q9Y2L9 MIR598-201ENST00000384868 97 ntBASIC0.5□□□□□ -2.33
LRCH1Q9Y2L9 AL158147.1-201ENST00000443970 75 ntBASIC0.5□□□□□ -2.33
LRCH1Q9Y2L9 RNU7-48P-201ENST00000458875 63 ntBASIC0.5□□□□□ -2.33
LRCH1Q9Y2L9 RNU7-2P-201ENST00000516096 62 ntBASIC0.5□□□□□ -2.33
LRCH1Q9Y2L9 MIR6513-201ENST00000621188 64 ntBASIC0.5□□□□□ -2.33
LRCH1Q9Y2L9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.5□□□□□ -2.33
LRCH1Q9Y2L9 MIRLET7D-201ENST00000362263 87 ntBASIC0.49□□□□□ -2.33
LRCH1Q9Y2L9 SNORD118-201ENST00000363593 134 ntBASIC0.49□□□□□ -2.33
LRCH1Q9Y2L9 RNA5SP245-201ENST00000364239 121 ntBASIC0.49□□□□□ -2.33
LRCH1Q9Y2L9 RNU6-1229P-201ENST00000364295 107 ntBASIC0.49□□□□□ -2.33
LRCH1Q9Y2L9 MIR1263-201ENST00000408324 86 ntBASIC0.49□□□□□ -2.33
LRCH1Q9Y2L9 RNU6-255P-201ENST00000516957 105 ntBASIC0.49□□□□□ -2.33
LRCH1Q9Y2L9 MIR3163-201ENST00000581592 73 ntBASIC0.49□□□□□ -2.33
LRCH1Q9Y2L9 Y_RNA.56-201ENST00000362798 112 ntBASIC0.48□□□□□ -2.33
LRCH1Q9Y2L9 Y_RNA.98-201ENST00000363109 102 ntBASIC0.48□□□□□ -2.33
LRCH1Q9Y2L9 SNORA63.5-201ENST00000363548 123 ntBASIC0.48□□□□□ -2.33
LRCH1Q9Y2L9 MT-TI-201ENST00000387365 69 ntBASIC0.48□□□□□ -2.33
LRCH1Q9Y2L9 RNA5SP136-201ENST00000410906 107 ntBASIC0.48□□□□□ -2.33
LRCH1Q9Y2L9 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
LRCH1Q9Y2L9 RNA5SP268-201ENST00000516828 124 ntBASIC0.48□□□□□ -2.33
LRCH1Q9Y2L9 AC087741.2-201ENST00000619415 172 ntBASIC0.48□□□□□ -2.33
LRCH1Q9Y2L9 MIR7111-201ENST00000619751 72 ntBASIC0.48□□□□□ -2.33
LRCH1Q9Y2L9 Y_RNA.213-201ENST00000364178 111 ntBASIC0.47□□□□□ -2.33
LRCH1Q9Y2L9 RNU6-1307P-201ENST00000391012 103 ntBASIC0.47□□□□□ -2.33
LRCH1Q9Y2L9 RNA5SP47-201ENST00000517230 109 ntBASIC0.47□□□□□ -2.33
LRCH1Q9Y2L9 MIR4639-201ENST00000584938 69 ntBASIC0.47□□□□□ -2.33
LRCH1Q9Y2L9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.47□□□□□ -2.33
LRCH1Q9Y2L9 Y_RNA.198-201ENST00000364013 98 ntBASIC0.46□□□□□ -2.34
LRCH1Q9Y2L9 RNU6-865P-201ENST00000364772 107 ntBASIC0.46□□□□□ -2.34
LRCH1Q9Y2L9 SNORD115-35-201ENST00000365122 82 ntBASIC0.46□□□□□ -2.34
LRCH1Q9Y2L9 SNORD28-201ENST00000384706 75 ntBASIC0.46□□□□□ -2.34
LRCH1Q9Y2L9 MIR613-201ENST00000385248 95 ntBASIC0.46□□□□□ -2.34
LRCH1Q9Y2L9 MIR759-201ENST00000390224 91 ntBASIC0.46□□□□□ -2.34
LRCH1Q9Y2L9 SUMO1P3-201ENST00000439961 304 ntBASIC0.46□□□□□ -2.34
LRCH1Q9Y2L9 SCARNA16.5-201ENST00000517114 183 ntBASIC0.46□□□□□ -2.34
LRCH1Q9Y2L9 MIR4500-201ENST00000579472 76 ntBASIC0.46□□□□□ -2.34
LRCH1Q9Y2L9 TUG1_4.1-201ENST00000619464 181 ntBASIC0.46□□□□□ -2.34
LRCH1Q9Y2L9 Y_RNA.328-201ENST00000365208 113 ntBASIC0.45□□□□□ -2.34
LRCH1Q9Y2L9 Y_RNA.343-201ENST00000365354 112 ntBASIC0.45□□□□□ -2.34
LRCH1Q9Y2L9 RNU6-907P-201ENST00000390924 102 ntBASIC0.45□□□□□ -2.34
LRCH1Q9Y2L9 MTND4LP9-201ENST00000427694 174 ntBASIC0.45□□□□□ -2.34
LRCH1Q9Y2L9 AC092628.1-201ENST00000436250 252 ntBASIC0.45□□□□□ -2.34
LRCH1Q9Y2L9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.45□□□□□ -2.34
LRCH1Q9Y2L9 AP001362.1-201ENST00000625165 124 ntBASIC0.45□□□□□ -2.34
LRCH1Q9Y2L9 SNORD44.1-201ENST00000363202 61 ntBASIC0.44□□□□□ -2.34
LRCH1Q9Y2L9 RNY1P5-201ENST00000383890 115 ntBASIC0.44□□□□□ -2.34
LRCH1Q9Y2L9 RNU6-346P-201ENST00000516288 111 ntBASIC0.44□□□□□ -2.34
LRCH1Q9Y2L9 RNU6-781P-201ENST00000516377 101 ntBASIC0.44□□□□□ -2.34
LRCH1Q9Y2L9 MIR548H5-201ENST00000580314 60 ntBASIC0.44□□□□□ -2.34
LRCH1Q9Y2L9 PVT1_3.1-201ENST00000620853 95 ntBASIC0.44□□□□□ -2.34
LRCH1Q9Y2L9 AC244669.1-204ENST00000621564 178 ntBASIC0.44□□□□□ -2.34
LRCH1Q9Y2L9 MIR6828-201ENST00000636181 60 ntBASIC0.44□□□□□ -2.34
LRCH1Q9Y2L9 SNORD115-19-201ENST00000363098 82 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 311.9 ms