Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNU4-67P-201ENST00000364569 141 ntBASIC1.19□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-1107P-201ENST00000364817 104 ntBASIC1.19□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-934P-201ENST00000365154 107 ntBASIC1.19□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.19□□□□□ -2.22
SSX2IPQ9Y2D8 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-994P-201ENST00000410507 111 ntBASIC1.19□□□□□ -2.22
SSX2IPQ9Y2D8 RNU7-2P-201ENST00000516096 62 ntBASIC1.19□□□□□ -2.22
SSX2IPQ9Y2D8 AC068339.1-201ENST00000526965 141 ntBASIC1.19□□□□□ -2.22
SSX2IPQ9Y2D8 MIR1255B1-201ENST00000636325 63 ntBASIC1.19□□□□□ -2.22
SSX2IPQ9Y2D8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SSX2IPQ9Y2D8 Y_RNA.155-201ENST00000363632 101 ntBASIC1.18□□□□□ -2.22
SSX2IPQ9Y2D8 SNORA22-201ENST00000383907 134 ntBASIC1.18□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-409P-201ENST00000384114 104 ntBASIC1.18□□□□□ -2.22
SSX2IPQ9Y2D8 MIR19B1-201ENST00000384829 87 ntBASIC1.18□□□□□ -2.22
SSX2IPQ9Y2D8 MIR206-201ENST00000384872 86 ntBASIC1.18□□□□□ -2.22
SSX2IPQ9Y2D8 RNY4P18-201ENST00000391107 89 ntBASIC1.18□□□□□ -2.22
SSX2IPQ9Y2D8 MIR548J-201ENST00000408833 112 ntBASIC1.18□□□□□ -2.22
SSX2IPQ9Y2D8 RNU7-40P-201ENST00000516397 64 ntBASIC1.18□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-521P-201ENST00000516663 105 ntBASIC1.18□□□□□ -2.22
SSX2IPQ9Y2D8 MIR5009-201ENST00000578736 100 ntBASIC1.18□□□□□ -2.22
SSX2IPQ9Y2D8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.17□□□□□ -2.22
SSX2IPQ9Y2D8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
SSX2IPQ9Y2D8 Y_RNA.205-201ENST00000364128 113 ntBASIC1.17□□□□□ -2.22
SSX2IPQ9Y2D8 Y_RNA.323-201ENST00000365157 109 ntBASIC1.17□□□□□ -2.22
SSX2IPQ9Y2D8 U8.15-201ENST00000390947 134 ntBASIC1.17□□□□□ -2.22
SSX2IPQ9Y2D8 AL035461.1-201ENST00000421490 332 ntBASIC1.17□□□□□ -2.22
SSX2IPQ9Y2D8 AC133485.1-201ENST00000567176 124 ntBASIC1.17□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-94P-201ENST00000607728 107 ntBASIC1.17□□□□□ -2.22
SSX2IPQ9Y2D8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.17□□□□□ -2.22
SSX2IPQ9Y2D8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.17□□□□□ -2.22
SSX2IPQ9Y2D8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
SSX2IPQ9Y2D8 AL391516.1-201ENST00000554380 2449 ntBASIC1.16□□□□□ -2.22
SSX2IPQ9Y2D8 U8.6-201ENST00000364939 135 ntBASIC1.16□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.16□□□□□ -2.22
SSX2IPQ9Y2D8 SNORD93-201ENST00000408813 74 ntBASIC1.16□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-733P-201ENST00000410759 104 ntBASIC1.16□□□□□ -2.22
SSX2IPQ9Y2D8 SNORD83.1-201ENST00000411362 77 ntBASIC1.16□□□□□ -2.22
SSX2IPQ9Y2D8 RPS26P5-201ENST00000418544 335 ntBASIC1.16□□□□□ -2.22
SSX2IPQ9Y2D8 AC067940.1-201ENST00000458411 300 ntBASIC1.16□□□□□ -2.22
SSX2IPQ9Y2D8 RNU7-185P-201ENST00000459215 60 ntBASIC1.16□□□□□ -2.22
SSX2IPQ9Y2D8 snoU13.21-201ENST00000459368 105 ntBASIC1.16□□□□□ -2.22
SSX2IPQ9Y2D8 AC105081.1-201ENST00000617727 106 ntBASIC1.16□□□□□ -2.22
SSX2IPQ9Y2D8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.16□□□□□ -2.22
SSX2IPQ9Y2D8 AC023934.1-201ENST00000574529 2389 ntBASIC1.15□□□□□ -2.22
SSX2IPQ9Y2D8 Y_RNA.98-201ENST00000363109 102 ntBASIC1.15□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-865P-201ENST00000364772 107 ntBASIC1.15□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-1014P-201ENST00000383940 103 ntBASIC1.15□□□□□ -2.23
SSX2IPQ9Y2D8 Y_RNA.448-201ENST00000384185 108 ntBASIC1.15□□□□□ -2.23
SSX2IPQ9Y2D8 MIR1257-201ENST00000408490 117 ntBASIC1.15□□□□□ -2.23
SSX2IPQ9Y2D8 SNORA7.5-201ENST00000410672 110 ntBASIC1.15□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-1018P-201ENST00000516577 106 ntBASIC1.15□□□□□ -2.23
SSX2IPQ9Y2D8 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
SSX2IPQ9Y2D8 MIR4771-2-201ENST00000577758 74 ntBASIC1.15□□□□□ -2.23
SSX2IPQ9Y2D8 MIR4771-1-201ENST00000582617 74 ntBASIC1.15□□□□□ -2.23
SSX2IPQ9Y2D8 AC103810.9-201ENST00000606688 112 ntBASIC1.15□□□□□ -2.23
SSX2IPQ9Y2D8 MIR1-1-201ENST00000362147 71 ntBASIC1.14□□□□□ -2.23
SSX2IPQ9Y2D8 Y_RNA.328-201ENST00000365208 113 ntBASIC1.14□□□□□ -2.23
SSX2IPQ9Y2D8 MIR200A-201ENST00000384875 90 ntBASIC1.14□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-1321P-201ENST00000390905 107 ntBASIC1.14□□□□□ -2.23
SSX2IPQ9Y2D8 MIR1302-5-201ENST00000408164 150 ntBASIC1.14□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.14□□□□□ -2.23
SSX2IPQ9Y2D8 RNU7-48P-201ENST00000458875 63 ntBASIC1.14□□□□□ -2.23
SSX2IPQ9Y2D8 AL512310.12-203ENST00000640543 90 ntBASIC1.14□□□□□ -2.23
SSX2IPQ9Y2D8 RNU1-124P-201ENST00000363861 145 ntBASIC1.13□□□□□ -2.23
SSX2IPQ9Y2D8 RNY1P2-201ENST00000364820 117 ntBASIC1.13□□□□□ -2.23
SSX2IPQ9Y2D8 RNU1-36P-201ENST00000365130 165 ntBASIC1.13□□□□□ -2.23
SSX2IPQ9Y2D8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.13□□□□□ -2.23
SSX2IPQ9Y2D8 FABP5P4-201ENST00000437203 171 ntBASIC1.13□□□□□ -2.23
SSX2IPQ9Y2D8 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.13□□□□□ -2.23
SSX2IPQ9Y2D8 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.13□□□□□ -2.23
SSX2IPQ9Y2D8 MIR6767-201ENST00000637302 66 ntBASIC1.13□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-755P-201ENST00000364400 103 ntBASIC1.12□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-44P-201ENST00000384045 107 ntBASIC1.12□□□□□ -2.23
SSX2IPQ9Y2D8 MIR125B2-201ENST00000385128 89 ntBASIC1.12□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-679P-201ENST00000391003 106 ntBASIC1.12□□□□□ -2.23
SSX2IPQ9Y2D8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.12□□□□□ -2.23
SSX2IPQ9Y2D8 AL136317.1-201ENST00000612653 226 ntBASIC1.12□□□□□ -2.23
SSX2IPQ9Y2D8 MIR6857-201ENST00000613267 93 ntBASIC1.12□□□□□ -2.23
SSX2IPQ9Y2D8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
SSX2IPQ9Y2D8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-1313P-201ENST00000362622 102 ntBASIC1.11□□□□□ -2.23
SSX2IPQ9Y2D8 Y_RNA.360-201ENST00000365512 102 ntBASIC1.11□□□□□ -2.23
SSX2IPQ9Y2D8 Y_RNA.374-201ENST00000365606 101 ntBASIC1.11□□□□□ -2.23
SSX2IPQ9Y2D8 MIR605-201ENST00000385078 83 ntBASIC1.11□□□□□ -2.23
SSX2IPQ9Y2D8 MIR100-201ENST00000385259 80 ntBASIC1.11□□□□□ -2.23
SSX2IPQ9Y2D8 AC096949.1-201ENST00000412047 152 ntBASIC1.11□□□□□ -2.23
SSX2IPQ9Y2D8 MIR4694-201ENST00000578534 80 ntBASIC1.11□□□□□ -2.23
SSX2IPQ9Y2D8 MIR4491-201ENST00000581087 68 ntBASIC1.11□□□□□ -2.23
SSX2IPQ9Y2D8 MIR4676-201ENST00000583078 72 ntBASIC1.11□□□□□ -2.23
SSX2IPQ9Y2D8 AP001362.1-201ENST00000625165 124 ntBASIC1.11□□□□□ -2.23
SSX2IPQ9Y2D8 Y_RNA.81-201ENST00000362997 102 ntBASIC1.1□□□□□ -2.23
SSX2IPQ9Y2D8 Y_RNA.163-201ENST00000363702 113 ntBASIC1.1□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-1113P-201ENST00000384348 107 ntBASIC1.1□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-106P-201ENST00000384405 107 ntBASIC1.1□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-1307P-201ENST00000391012 103 ntBASIC1.1□□□□□ -2.23
SSX2IPQ9Y2D8 MIR1827-201ENST00000408549 66 ntBASIC1.1□□□□□ -2.23
SSX2IPQ9Y2D8 RNU4-83P-201ENST00000410863 133 ntBASIC1.1□□□□□ -2.23
SSX2IPQ9Y2D8 RNU6-977P-201ENST00000516411 103 ntBASIC1.1□□□□□ -2.23
SSX2IPQ9Y2D8 AC138749.4-201ENST00000563970 127 ntBASIC1.1□□□□□ -2.23
SSX2IPQ9Y2D8 AC020891.4-201ENST00000605745 93 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 228.2 ms