Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 MIR30D-201ENST00000362283 70 ntBASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 SNORD114-1-201ENST00000362705 72 ntBASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 SNORD115-22-201ENST00000364456 82 ntBASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 MIR520A-201ENST00000384862 85 ntBASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 U8.13-201ENST00000390842 128 ntBASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 RNU11-3P-201ENST00000391111 133 ntBASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 AC110620.1-201ENST00000416042 228 ntBASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 snoU13.26-201ENST00000459452 105 ntBASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 MIR4511-201ENST00000582784 87 ntBASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 MIR3935-201ENST00000583472 104 ntBASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 AC245884.12-201ENST00000615364 59 ntBASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 MIR6740-201ENST00000618268 113 ntBASIC2.48□□□□□ -2.01
NEDD1Q8NHV4 RNU6-112P-201ENST00000363599 104 ntBASIC2.47□□□□□ -2.01
NEDD1Q8NHV4 MIR588-201ENST00000384900 83 ntBASIC2.47□□□□□ -2.01
NEDD1Q8NHV4 snoU13.27-201ENST00000459278 104 ntBASIC2.47□□□□□ -2.01
NEDD1Q8NHV4 MIR5002-201ENST00000584713 97 ntBASIC2.47□□□□□ -2.01
NEDD1Q8NHV4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.47□□□□□ -2.01
NEDD1Q8NHV4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NEDD1Q8NHV4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
NEDD1Q8NHV4 RNU6-669P-201ENST00000365575 107 ntBASIC2.46□□□□□ -2.02
NEDD1Q8NHV4 MIR1302-7-201ENST00000408841 72 ntBASIC2.46□□□□□ -2.02
NEDD1Q8NHV4 HMGN2P3-201ENST00000433603 273 ntBASIC2.46□□□□□ -2.02
NEDD1Q8NHV4 HMGN2P5-201ENST00000436882 273 ntBASIC2.46□□□□□ -2.02
NEDD1Q8NHV4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NEDD1Q8NHV4 AC104435.1-201ENST00000483483 166 ntBASIC2.46□□□□□ -2.02
NEDD1Q8NHV4 MIR3675-201ENST00000583661 73 ntBASIC2.46□□□□□ -2.02
NEDD1Q8NHV4 MIR3140-201ENST00000583685 90 ntBASIC2.46□□□□□ -2.02
NEDD1Q8NHV4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.45□□□□□ -2.02
NEDD1Q8NHV4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.45□□□□□ -2.02
NEDD1Q8NHV4 SNORA6-201ENST00000384033 151 ntBASIC2.45□□□□□ -2.02
NEDD1Q8NHV4 RNU6-614P-201ENST00000384369 107 ntBASIC2.45□□□□□ -2.02
NEDD1Q8NHV4 Y_RNA.606-201ENST00000410579 103 ntBASIC2.45□□□□□ -2.02
NEDD1Q8NHV4 SNORD63B-201ENST00000411005 70 ntBASIC2.45□□□□□ -2.02
NEDD1Q8NHV4 AL606490.4-201ENST00000423117 127 ntBASIC2.45□□□□□ -2.02
NEDD1Q8NHV4 RNU6-977P-201ENST00000516411 103 ntBASIC2.45□□□□□ -2.02
NEDD1Q8NHV4 RNU2-19P-201ENST00000517288 84 ntBASIC2.45□□□□□ -2.02
NEDD1Q8NHV4 uc_338.6-201ENST00000613544 171 ntBASIC2.45□□□□□ -2.02
NEDD1Q8NHV4 U6.59-201ENST00000615686 107 ntBASIC2.45□□□□□ -2.02
NEDD1Q8NHV4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NEDD1Q8NHV4 RNU6-1194P-201ENST00000516208 104 ntBASIC2.44□□□□□ -2.02
NEDD1Q8NHV4 RNU6-881P-201ENST00000516813 102 ntBASIC2.44□□□□□ -2.02
NEDD1Q8NHV4 SNORA4-201ENST00000584302 138 ntBASIC2.44□□□□□ -2.02
NEDD1Q8NHV4 AP000942.3-201ENST00000603702 160 ntBASIC2.44□□□□□ -2.02
NEDD1Q8NHV4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.44□□□□□ -2.02
NEDD1Q8NHV4 ZNF355P-201ENST00000427301 3216 ntBASIC2.44□□□□□ -2.02
NEDD1Q8NHV4 RNU1-148P-201ENST00000384472 162 ntBASIC2.43□□□□□ -2.02
NEDD1Q8NHV4 MIR144-201ENST00000384886 86 ntBASIC2.43□□□□□ -2.02
NEDD1Q8NHV4 SNORA48.1-201ENST00000390879 135 ntBASIC2.43□□□□□ -2.02
NEDD1Q8NHV4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.43□□□□□ -2.02
NEDD1Q8NHV4 AL109933.3-201ENST00000619095 188 ntBASIC2.43□□□□□ -2.02
NEDD1Q8NHV4 AC103706.3-201ENST00000636297 85 ntBASIC2.43□□□□□ -2.02
NEDD1Q8NHV4 RNU6-895P-201ENST00000384125 103 ntBASIC2.42□□□□□ -2.02
NEDD1Q8NHV4 RNU6-531P-201ENST00000516694 104 ntBASIC2.42□□□□□ -2.02
NEDD1Q8NHV4 MIR4769-201ENST00000584126 77 ntBASIC2.42□□□□□ -2.02
NEDD1Q8NHV4 AL096861.1-201ENST00000610899 123 ntBASIC2.42□□□□□ -2.02
NEDD1Q8NHV4 AL627230.6-201ENST00000611129 280 ntBASIC2.42□□□□□ -2.02
NEDD1Q8NHV4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NEDD1Q8NHV4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NEDD1Q8NHV4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NEDD1Q8NHV4 MIRLET7G-201ENST00000362280 84 ntBASIC2.41□□□□□ -2.02
NEDD1Q8NHV4 SNORD45.1-201ENST00000363181 77 ntBASIC2.41□□□□□ -2.02
NEDD1Q8NHV4 RNU11-2P-201ENST00000516898 142 ntBASIC2.41□□□□□ -2.02
NEDD1Q8NHV4 MIR5089-201ENST00000580047 84 ntBASIC2.41□□□□□ -2.02
NEDD1Q8NHV4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
NEDD1Q8NHV4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NEDD1Q8NHV4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
NEDD1Q8NHV4 SNORD113.1-201ENST00000363280 73 ntBASIC2.4□□□□□ -2.03
NEDD1Q8NHV4 RNU6-824P-201ENST00000363724 104 ntBASIC2.4□□□□□ -2.03
NEDD1Q8NHV4 SNORA24B-201ENST00000384176 131 ntBASIC2.4□□□□□ -2.03
NEDD1Q8NHV4 MIR653-201ENST00000385279 96 ntBASIC2.4□□□□□ -2.03
NEDD1Q8NHV4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
NEDD1Q8NHV4 RNA5SP501-201ENST00000410990 112 ntBASIC2.4□□□□□ -2.03
NEDD1Q8NHV4 TRAJ51-201ENST00000504127 63 ntBASIC2.4□□□□□ -2.03
NEDD1Q8NHV4 SNORA25.16-201ENST00000516741 121 ntBASIC2.4□□□□□ -2.03
NEDD1Q8NHV4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.4□□□□□ -2.03
NEDD1Q8NHV4 MIR1289-2-201ENST00000408360 111 ntBASIC2.39□□□□□ -2.03
NEDD1Q8NHV4 MIR4491-201ENST00000581087 68 ntBASIC2.39□□□□□ -2.03
NEDD1Q8NHV4 MIR3192-201ENST00000584920 77 ntBASIC2.39□□□□□ -2.03
NEDD1Q8NHV4 U6.81-201ENST00000612550 106 ntBASIC2.39□□□□□ -2.03
NEDD1Q8NHV4 MIR6895-201ENST00000613497 78 ntBASIC2.39□□□□□ -2.03
NEDD1Q8NHV4 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.39□□□□□ -2.03
NEDD1Q8NHV4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 RNU6-1216P-201ENST00000362590 107 ntBASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 RNU6-829P-201ENST00000363700 112 ntBASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 RNU6-203P-201ENST00000384038 104 ntBASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 Y_RNA.588-201ENST00000391254 102 ntBASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 RNU6-1165P-201ENST00000410119 107 ntBASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 RNU7-195P-201ENST00000458793 62 ntBASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 RNA5SP481-201ENST00000516814 122 ntBASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 MIR5694-201ENST00000581190 76 ntBASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 MIR4696-201ENST00000581431 70 ntBASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 MIR8053-201ENST00000613344 75 ntBASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 TRDV1-202ENST00000621643 102 ntBASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.38□□□□□ -2.03
NEDD1Q8NHV4 Y_RNA.236-201ENST00000364427 111 ntBASIC2.37□□□□□ -2.03
NEDD1Q8NHV4 MIR518A2-201ENST00000384966 87 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms