Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 MIR664A-201ENST00000626086 82 ntBASIC2.39□□□□□ -2.03
RETREG3Q86VR2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
RETREG3Q86VR2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
RETREG3Q86VR2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
RETREG3Q86VR2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RETREG3Q86VR2 RNU6-1260P-201ENST00000362944 107 ntBASIC2.38□□□□□ -2.03
RETREG3Q86VR2 RNA5SP126-201ENST00000365092 109 ntBASIC2.38□□□□□ -2.03
RETREG3Q86VR2 RNU6-1051P-201ENST00000365471 102 ntBASIC2.38□□□□□ -2.03
RETREG3Q86VR2 AL606490.4-201ENST00000423117 127 ntBASIC2.38□□□□□ -2.03
RETREG3Q86VR2 AC074348.1-201ENST00000426503 132 ntBASIC2.38□□□□□ -2.03
RETREG3Q86VR2 AC092628.1-201ENST00000436250 252 ntBASIC2.38□□□□□ -2.03
RETREG3Q86VR2 snoU13.9-201ENST00000458927 103 ntBASIC2.38□□□□□ -2.03
RETREG3Q86VR2 RNU6-634P-201ENST00000459134 106 ntBASIC2.38□□□□□ -2.03
RETREG3Q86VR2 snoU13.21-201ENST00000459368 105 ntBASIC2.38□□□□□ -2.03
RETREG3Q86VR2 AL033523.1-201ENST00000605153 153 ntBASIC2.38□□□□□ -2.03
RETREG3Q86VR2 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
RETREG3Q86VR2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RETREG3Q86VR2 MIR21-201ENST00000362134 72 ntBASIC2.37□□□□□ -2.03
RETREG3Q86VR2 RNA5SP456-201ENST00000364002 114 ntBASIC2.37□□□□□ -2.03
RETREG3Q86VR2 RNY4P3-201ENST00000365254 95 ntBASIC2.37□□□□□ -2.03
RETREG3Q86VR2 RNU6-587P-201ENST00000391282 106 ntBASIC2.37□□□□□ -2.03
RETREG3Q86VR2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.37□□□□□ -2.03
RETREG3Q86VR2 SNORD83.1-201ENST00000411362 77 ntBASIC2.37□□□□□ -2.03
RETREG3Q86VR2 RPS27P16-201ENST00000425758 201 ntBASIC2.37□□□□□ -2.03
RETREG3Q86VR2 AC125388.1-201ENST00000459631 156 ntBASIC2.37□□□□□ -2.03
RETREG3Q86VR2 UBE2DNL-203ENST00000474922 222 ntBASIC2.37□□□□□ -2.03
RETREG3Q86VR2 AC079140.2-201ENST00000506193 142 ntBASIC2.37□□□□□ -2.03
RETREG3Q86VR2 RNA5SP356-201ENST00000515972 94 ntBASIC2.37□□□□□ -2.03
RETREG3Q86VR2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.37□□□□□ -2.03
RETREG3Q86VR2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RETREG3Q86VR2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
RETREG3Q86VR2 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
RETREG3Q86VR2 Y_RNA.596-201ENST00000410462 109 ntBASIC2.36□□□□□ -2.03
RETREG3Q86VR2 RNA5SP184-201ENST00000411071 108 ntBASIC2.36□□□□□ -2.03
RETREG3Q86VR2 snoU13.17-201ENST00000458802 104 ntBASIC2.36□□□□□ -2.03
RETREG3Q86VR2 Y_RNA.697-201ENST00000516776 113 ntBASIC2.36□□□□□ -2.03
RETREG3Q86VR2 MIR4299-201ENST00000577899 72 ntBASIC2.36□□□□□ -2.03
RETREG3Q86VR2 MIR3664-201ENST00000579074 99 ntBASIC2.36□□□□□ -2.03
RETREG3Q86VR2 MIR5694-201ENST00000581190 76 ntBASIC2.36□□□□□ -2.03
RETREG3Q86VR2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
RETREG3Q86VR2 SNORD1A-201ENST00000364968 72 ntBASIC2.35□□□□□ -2.03
RETREG3Q86VR2 Y_RNA.330-201ENST00000365230 109 ntBASIC2.35□□□□□ -2.03
RETREG3Q86VR2 SNORD101-201ENST00000384027 73 ntBASIC2.35□□□□□ -2.03
RETREG3Q86VR2 RNU6-1065P-201ENST00000384513 106 ntBASIC2.35□□□□□ -2.03
RETREG3Q86VR2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.35□□□□□ -2.03
RETREG3Q86VR2 RNU6-1054P-201ENST00000411293 104 ntBASIC2.35□□□□□ -2.03
RETREG3Q86VR2 MIR3937-201ENST00000580135 106 ntBASIC2.35□□□□□ -2.03
RETREG3Q86VR2 MIR302D-201ENST00000362275 68 ntBASIC2.34□□□□□ -2.03
RETREG3Q86VR2 U8.2-201ENST00000363156 134 ntBASIC2.34□□□□□ -2.03
RETREG3Q86VR2 Y_RNA.207-201ENST00000364142 106 ntBASIC2.34□□□□□ -2.03
RETREG3Q86VR2 Y_RNA.340-201ENST00000365330 92 ntBASIC2.34□□□□□ -2.03
RETREG3Q86VR2 SNORA8.1-201ENST00000384250 140 ntBASIC2.34□□□□□ -2.03
RETREG3Q86VR2 SNORA11.2-201ENST00000408318 127 ntBASIC2.34□□□□□ -2.03
RETREG3Q86VR2 MIR3162-201ENST00000581818 82 ntBASIC2.34□□□□□ -2.03
RETREG3Q86VR2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.34□□□□□ -2.03
RETREG3Q86VR2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RETREG3Q86VR2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RETREG3Q86VR2 RNU6-664P-201ENST00000362381 107 ntBASIC2.33□□□□□ -2.04
RETREG3Q86VR2 Y_RNA.42-201ENST00000362660 108 ntBASIC2.33□□□□□ -2.04
RETREG3Q86VR2 SNORD33-201ENST00000362761 85 ntBASIC2.33□□□□□ -2.04
RETREG3Q86VR2 RNU6-649P-201ENST00000384463 107 ntBASIC2.33□□□□□ -2.04
RETREG3Q86VR2 MIR196B-201ENST00000384852 84 ntBASIC2.33□□□□□ -2.04
RETREG3Q86VR2 AC097635.1-201ENST00000450678 155 ntBASIC2.33□□□□□ -2.04
RETREG3Q86VR2 RNU6-765P-201ENST00000516916 99 ntBASIC2.33□□□□□ -2.04
RETREG3Q86VR2 MIR4319-201ENST00000577285 85 ntBASIC2.33□□□□□ -2.04
RETREG3Q86VR2 MIR4696-201ENST00000581431 70 ntBASIC2.33□□□□□ -2.04
RETREG3Q86VR2 U6.100-201ENST00000636230 99 ntBASIC2.33□□□□□ -2.04
RETREG3Q86VR2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RETREG3Q86VR2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.33□□□□□ -2.04
RETREG3Q86VR2 ZNF209P-201ENST00000593450 2304 ntBASIC2.33□□□□□ -2.04
RETREG3Q86VR2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RETREG3Q86VR2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
RETREG3Q86VR2 RNU6-934P-201ENST00000365154 107 ntBASIC2.32□□□□□ -2.04
RETREG3Q86VR2 Y_RNA.371-201ENST00000365591 113 ntBASIC2.32□□□□□ -2.04
RETREG3Q86VR2 MIR154-201ENST00000385243 84 ntBASIC2.32□□□□□ -2.04
RETREG3Q86VR2 HMGN2P23-201ENST00000456759 269 ntBASIC2.32□□□□□ -2.04
RETREG3Q86VR2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.32□□□□□ -2.04
RETREG3Q86VR2 RNU6-859P-201ENST00000362728 107 ntBASIC2.31□□□□□ -2.04
RETREG3Q86VR2 SNORD113.3-201ENST00000364630 78 ntBASIC2.31□□□□□ -2.04
RETREG3Q86VR2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.31□□□□□ -2.04
RETREG3Q86VR2 RNU6-165P-201ENST00000517170 99 ntBASIC2.31□□□□□ -2.04
RETREG3Q86VR2 MIR4771-2-201ENST00000577758 74 ntBASIC2.31□□□□□ -2.04
RETREG3Q86VR2 MIR4771-1-201ENST00000582617 74 ntBASIC2.31□□□□□ -2.04
RETREG3Q86VR2 AC103810.8-201ENST00000607347 118 ntBASIC2.31□□□□□ -2.04
RETREG3Q86VR2 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.31□□□□□ -2.04
RETREG3Q86VR2 Y_RNA.36-201ENST00000362602 112 ntBASIC2.3□□□□□ -2.04
RETREG3Q86VR2 RNU6-1241P-201ENST00000384536 107 ntBASIC2.3□□□□□ -2.04
RETREG3Q86VR2 MIR30A-201ENST00000385092 71 ntBASIC2.3□□□□□ -2.04
RETREG3Q86VR2 MIR125B2-201ENST00000385128 89 ntBASIC2.3□□□□□ -2.04
RETREG3Q86VR2 SNORD30.1-201ENST00000391309 70 ntBASIC2.3□□□□□ -2.04
RETREG3Q86VR2 SNORD109B-201ENST00000458961 67 ntBASIC2.3□□□□□ -2.04
RETREG3Q86VR2 SNORD109A-201ENST00000459128 67 ntBASIC2.3□□□□□ -2.04
RETREG3Q86VR2 RNA5SP320-201ENST00000516263 124 ntBASIC2.3□□□□□ -2.04
RETREG3Q86VR2 MIR514B-201ENST00000516774 80 ntBASIC2.3□□□□□ -2.04
RETREG3Q86VR2 SNORA44.1-201ENST00000517031 108 ntBASIC2.3□□□□□ -2.04
RETREG3Q86VR2 AC138907.6-201ENST00000568401 126 ntBASIC2.3□□□□□ -2.04
RETREG3Q86VR2 AC138869.1-201ENST00000568623 124 ntBASIC2.3□□□□□ -2.04
RETREG3Q86VR2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RETREG3Q86VR2 AC062016.1-201ENST00000355719 319 ntBASIC2.29□□□□□ -2.04
RETREG3Q86VR2 MIR599-201ENST00000385069 95 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms