Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ATG4DQ86TL0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ATG4DQ86TL0 MIRLET7F1-201ENST00000362202 87 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 Y_RNA.283-201ENST00000364798 112 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 Y_RNA.386-201ENST00000383913 105 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 RNU1-52P-201ENST00000384190 164 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 Y_RNA.491-201ENST00000384417 107 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 MIR520H-201ENST00000385126 88 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 RN7SKP223-201ENST00000410582 62 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 RNA5SP100-201ENST00000410903 110 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 RNA5SP59-201ENST00000410922 110 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 RNU6-634P-201ENST00000459134 106 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 RNU6-807P-201ENST00000516805 107 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 SNORA31.17-201ENST00000516953 127 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 MIR4658-201ENST00000584344 65 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 MIR6740-201ENST00000618268 113 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.03□□□□□ -2.08
ATG4DQ86TL0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ATG4DQ86TL0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ATG4DQ86TL0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ATG4DQ86TL0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.02□□□□□ -2.09
ATG4DQ86TL0 RNU6-208P-201ENST00000362431 107 ntBASIC2.02□□□□□ -2.09
ATG4DQ86TL0 SNORA6-201ENST00000384033 151 ntBASIC2.02□□□□□ -2.09
ATG4DQ86TL0 RNU6-649P-201ENST00000384463 107 ntBASIC2.02□□□□□ -2.09
ATG4DQ86TL0 MIR221-201ENST00000385135 110 ntBASIC2.02□□□□□ -2.09
ATG4DQ86TL0 RNU6-243P-201ENST00000391140 107 ntBASIC2.02□□□□□ -2.09
ATG4DQ86TL0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.02□□□□□ -2.09
ATG4DQ86TL0 AC015818.7-201ENST00000428754 109 ntBASIC2.02□□□□□ -2.09
ATG4DQ86TL0 RNU7-106P-201ENST00000459514 67 ntBASIC2.02□□□□□ -2.09
ATG4DQ86TL0 SNORA4-201ENST00000584302 138 ntBASIC2.02□□□□□ -2.09
ATG4DQ86TL0 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
ATG4DQ86TL0 AC245884.12-201ENST00000615364 59 ntBASIC2.02□□□□□ -2.09
ATG4DQ86TL0 MIR6715A-201ENST00000615929 79 ntBASIC2.02□□□□□ -2.09
ATG4DQ86TL0 AP006437.1-201ENST00000641440 3685 ntBASIC2.02□□□□□ -2.09
ATG4DQ86TL0 MIRLET7G-201ENST00000362280 84 ntBASIC2.01□□□□□ -2.09
ATG4DQ86TL0 MIR563-201ENST00000385080 79 ntBASIC2.01□□□□□ -2.09
ATG4DQ86TL0 RNU6-1254P-201ENST00000391266 104 ntBASIC2.01□□□□□ -2.09
ATG4DQ86TL0 SNORD30.1-201ENST00000391309 70 ntBASIC2.01□□□□□ -2.09
ATG4DQ86TL0 AC104435.1-201ENST00000483483 166 ntBASIC2.01□□□□□ -2.09
ATG4DQ86TL0 MIR3192-201ENST00000584920 77 ntBASIC2.01□□□□□ -2.09
ATG4DQ86TL0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.01□□□□□ -2.09
ATG4DQ86TL0 AP000942.3-201ENST00000603702 160 ntBASIC2.01□□□□□ -2.09
ATG4DQ86TL0 AL096861.1-201ENST00000610899 123 ntBASIC2.01□□□□□ -2.09
ATG4DQ86TL0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.01□□□□□ -2.09
ATG4DQ86TL0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ATG4DQ86TL0 MIR30D-201ENST00000362283 70 ntBASIC2□□□□□ -2.09
ATG4DQ86TL0 RNU6-1123P-201ENST00000362347 106 ntBASIC2□□□□□ -2.09
ATG4DQ86TL0 SNORA25.3-201ENST00000363205 127 ntBASIC2□□□□□ -2.09
ATG4DQ86TL0 RNU6-540P-201ENST00000384622 101 ntBASIC2□□□□□ -2.09
ATG4DQ86TL0 MIR653-201ENST00000385279 96 ntBASIC2□□□□□ -2.09
ATG4DQ86TL0 RNU6-205P-201ENST00000390858 107 ntBASIC2□□□□□ -2.09
ATG4DQ86TL0 RNU6-587P-201ENST00000391282 106 ntBASIC2□□□□□ -2.09
ATG4DQ86TL0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2□□□□□ -2.09
ATG4DQ86TL0 MIR1302-7-201ENST00000408841 72 ntBASIC2□□□□□ -2.09
ATG4DQ86TL0 AC245517.4-201ENST00000448601 281 ntBASIC2□□□□□ -2.09
ATG4DQ86TL0 RNU6-322P-201ENST00000516010 103 ntBASIC2□□□□□ -2.09
ATG4DQ86TL0 RNA5SP200-201ENST00000516360 103 ntBASIC2□□□□□ -2.09
ATG4DQ86TL0 SNORD111.1-201ENST00000516421 86 ntBASIC2□□□□□ -2.09
ATG4DQ86TL0 MIR1297-201ENST00000637311 77 ntBASIC2□□□□□ -2.09
ATG4DQ86TL0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
ATG4DQ86TL0 RNU6-957P-201ENST00000363652 99 ntBASIC1.99□□□□□ -2.09
ATG4DQ86TL0 RNU6-1165P-201ENST00000410119 107 ntBASIC1.99□□□□□ -2.09
ATG4DQ86TL0 RNA5SP425-201ENST00000410336 112 ntBASIC1.99□□□□□ -2.09
ATG4DQ86TL0 Y_RNA.596-201ENST00000410462 109 ntBASIC1.99□□□□□ -2.09
ATG4DQ86TL0 AC004965.1-201ENST00000413033 213 ntBASIC1.99□□□□□ -2.09
ATG4DQ86TL0 snoU13.17-201ENST00000458802 104 ntBASIC1.99□□□□□ -2.09
ATG4DQ86TL0 RNU6-303P-201ENST00000517091 106 ntBASIC1.99□□□□□ -2.09
ATG4DQ86TL0 MIR5694-201ENST00000581190 76 ntBASIC1.99□□□□□ -2.09
ATG4DQ86TL0 uc_338.6-201ENST00000613544 171 ntBASIC1.99□□□□□ -2.09
ATG4DQ86TL0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ATG4DQ86TL0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ATG4DQ86TL0 Y_RNA.12-201ENST00000362393 112 ntBASIC1.98□□□□□ -2.09
ATG4DQ86TL0 RNU5F-1-201ENST00000362507 117 ntBASIC1.98□□□□□ -2.09
ATG4DQ86TL0 Y_RNA.264-201ENST00000364665 102 ntBASIC1.98□□□□□ -2.09
ATG4DQ86TL0 MIR548U-201ENST00000390728 81 ntBASIC1.98□□□□□ -2.09
ATG4DQ86TL0 RNU6-360P-201ENST00000390944 104 ntBASIC1.98□□□□□ -2.09
ATG4DQ86TL0 SNORA48.3-201ENST00000391081 134 ntBASIC1.98□□□□□ -2.09
ATG4DQ86TL0 RNU6-466P-201ENST00000391224 103 ntBASIC1.98□□□□□ -2.09
ATG4DQ86TL0 AC074348.1-201ENST00000426503 132 ntBASIC1.98□□□□□ -2.09
ATG4DQ86TL0 RNU6-531P-201ENST00000516694 104 ntBASIC1.98□□□□□ -2.09
ATG4DQ86TL0 RNU6-922P-201ENST00000516753 99 ntBASIC1.98□□□□□ -2.09
ATG4DQ86TL0 SNORD92-201ENST00000585078 85 ntBASIC1.98□□□□□ -2.09
ATG4DQ86TL0 MIR6132-201ENST00000622083 109 ntBASIC1.98□□□□□ -2.09
ATG4DQ86TL0 RNU6-330P-201ENST00000363015 107 ntBASIC1.97□□□□□ -2.09
ATG4DQ86TL0 RNA5SP48-201ENST00000363969 126 ntBASIC1.97□□□□□ -2.09
ATG4DQ86TL0 Y_RNA.205-201ENST00000364128 113 ntBASIC1.97□□□□□ -2.09
ATG4DQ86TL0 RNA5SP259-201ENST00000365541 109 ntBASIC1.97□□□□□ -2.09
ATG4DQ86TL0 MIR194-1-201ENST00000384892 85 ntBASIC1.97□□□□□ -2.09
ATG4DQ86TL0 SNORD41-201ENST00000386967 70 ntBASIC1.97□□□□□ -2.09
ATG4DQ86TL0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.97□□□□□ -2.09
ATG4DQ86TL0 SNORA25.16-201ENST00000516741 121 ntBASIC1.97□□□□□ -2.09
ATG4DQ86TL0 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.97□□□□□ -2.09
ATG4DQ86TL0 U1.36-201ENST00000620684 176 ntBASIC1.97□□□□□ -2.09
ATG4DQ86TL0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ATG4DQ86TL0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
ATG4DQ86TL0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ATG4DQ86TL0 SNORD115-31-201ENST00000365318 82 ntBASIC1.96□□□□□ -2.1
ATG4DQ86TL0 SNORA67.3-201ENST00000384366 140 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms