Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU6-747P-201ENST00000390928 104 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 RNU6-241P-201ENST00000391148 104 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 MIR1185-1-201ENST00000408598 86 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 RNU6-1064P-201ENST00000410626 104 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 RNU6-602P-201ENST00000411155 105 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 RNU6-177P-201ENST00000411257 104 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 AC244023.1-201ENST00000426884 112 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 RNU7-164P-201ENST00000459221 62 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 AC004812.1-201ENST00000540773 146 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 MTND5P34-201ENST00000568888 325 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 MIR548AI-201ENST00000579940 88 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 AL359881.1-201ENST00000602916 267 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 AC242498.1-201ENST00000604134 111 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.8□□□□□ -2.28
NHLRC1Q6VVB1 SNORD113.3-201ENST00000364630 78 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 RNU6-396P-201ENST00000365369 105 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 Y_RNA.344-201ENST00000365381 112 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 RNU6-1307P-201ENST00000391012 103 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 AL353813.1-201ENST00000440700 253 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 RNU7-67P-201ENST00000459003 62 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 RNU7-80P-201ENST00000459562 61 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 RNU6-1110P-201ENST00000516462 101 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 AC023827.1-201ENST00000569247 97 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 Y_RNA.773-201ENST00000607168 90 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 AC106800.4-201ENST00000614905 153 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 MIR6779-201ENST00000617283 64 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 AC087741.2-201ENST00000619415 172 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 Z97988.1-201ENST00000637697 135 ntBASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
NHLRC1Q6VVB1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 SNORA22.1-201ENST00000362701 134 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 RNU6-654P-201ENST00000364373 107 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 SNORA1.1-201ENST00000364671 133 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 RNU6-110P-201ENST00000384508 104 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 SNORD12C-201ENST00000386307 89 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 RNA5SP95-201ENST00000410319 137 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 AL035461.1-201ENST00000421490 332 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 COX6CP6-201ENST00000490840 228 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 Y_RNA.709-201ENST00000516952 92 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 MIR5000-201ENST00000577717 103 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 FAM71BP1-201ENST00000604431 523 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 AL670379.3-201ENST00000605040 251 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 MIR1255B1-201ENST00000636325 63 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 U6.95-201ENST00000636931 70 ntBASIC0.78□□□□□ -2.28
NHLRC1Q6VVB1 RNU6-834P-201ENST00000362367 110 ntBASIC0.77□□□□□ -2.29
NHLRC1Q6VVB1 Y_RNA.81-201ENST00000362997 102 ntBASIC0.77□□□□□ -2.29
NHLRC1Q6VVB1 Y_RNA.198-201ENST00000364013 98 ntBASIC0.77□□□□□ -2.29
NHLRC1Q6VVB1 Y_RNA.430-201ENST00000384081 110 ntBASIC0.77□□□□□ -2.29
NHLRC1Q6VVB1 Y_RNA.454-201ENST00000384224 113 ntBASIC0.77□□□□□ -2.29
NHLRC1Q6VVB1 Y_RNA.531-201ENST00000384589 121 ntBASIC0.77□□□□□ -2.29
NHLRC1Q6VVB1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.77□□□□□ -2.29
NHLRC1Q6VVB1 AC096949.1-201ENST00000412047 152 ntBASIC0.77□□□□□ -2.29
NHLRC1Q6VVB1 Y_RNA.649-201ENST00000459077 103 ntBASIC0.77□□□□□ -2.29
NHLRC1Q6VVB1 snoU13.16-201ENST00000459350 104 ntBASIC0.77□□□□□ -2.29
NHLRC1Q6VVB1 MIR548AE2-201ENST00000583456 67 ntBASIC0.77□□□□□ -2.29
NHLRC1Q6VVB1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
NHLRC1Q6VVB1 SNORD115-2-201ENST00000362842 82 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 SNORD115-20-201ENST00000365099 82 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 Y_RNA.362-201ENST00000365518 110 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-1056P-201ENST00000383996 107 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 SNORD116-21-201ENST00000384507 92 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 MIR548A3-201ENST00000385297 97 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 RNA5SP136-201ENST00000410906 107 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 snoU13.21-201ENST00000459368 105 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 AC113410.1-201ENST00000505029 247 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 RNU7-70P-201ENST00000516941 66 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 AC007012.1-201ENST00000567192 175 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 MIR6740-201ENST00000618268 113 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 MIR6516-201ENST00000630554 81 ntBASIC0.76□□□□□ -2.29
NHLRC1Q6VVB1 MIR302B-201ENST00000362188 73 ntBASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-153P-201ENST00000364422 104 ntBASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 Y_RNA.346-201ENST00000365385 112 ntBASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 MIR548D2-201ENST00000384955 97 ntBASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-613P-201ENST00000410412 108 ntBASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 SNORA19.1-201ENST00000410656 129 ntBASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 RNU7-53P-201ENST00000516705 60 ntBASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-919P-201ENST00000516731 104 ntBASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 MIR3613-201ENST00000579844 87 ntBASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 AP000753.3-201ENST00000604083 169 ntBASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 AL353765.1-201ENST00000605514 183 ntBASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 uc_338.28-201ENST00000612082 187 ntBASIC0.75□□□□□ -2.29
NHLRC1Q6VVB1 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
NHLRC1Q6VVB1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.74□□□□□ -2.29
NHLRC1Q6VVB1 Y_RNA.85-201ENST00000363014 111 ntBASIC0.74□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-755P-201ENST00000364400 103 ntBASIC0.74□□□□□ -2.29
NHLRC1Q6VVB1 Y_RNA.281-201ENST00000364774 94 ntBASIC0.74□□□□□ -2.29
NHLRC1Q6VVB1 SNORA32-201ENST00000384072 121 ntBASIC0.74□□□□□ -2.29
NHLRC1Q6VVB1 RNU6-106P-201ENST00000384405 107 ntBASIC0.74□□□□□ -2.29
NHLRC1Q6VVB1 MIR563-201ENST00000385080 79 ntBASIC0.74□□□□□ -2.29
NHLRC1Q6VVB1 SNORD89-201ENST00000390981 114 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms