Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SNORA31.11-201ENST00000516528 139 ntBASIC2.66□□□□□ -1.98
CSB-PGBD3P0DP91 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.66□□□□□ -1.98
CSB-PGBD3P0DP91 Y_RNA.565-201ENST00000384719 101 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-447P-201ENST00000410293 104 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-1118P-201ENST00000410382 104 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-1076P-201ENST00000410397 104 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-355P-201ENST00000410427 104 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-791P-201ENST00000410467 104 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-705P-201ENST00000410601 104 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-1100P-201ENST00000410691 104 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-860P-201ENST00000410860 104 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-1217P-201ENST00000411276 104 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-785P-201ENST00000411324 104 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 RNU7-43P-201ENST00000516554 64 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 CYP3A52P-201ENST00000563326 91 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 SNORA77B-201ENST00000578179 125 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 SNRPGP19-201ENST00000603826 189 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 U6.90-201ENST00000614007 104 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 U6.70-201ENST00000620287 104 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 AP001362.1-201ENST00000625165 124 ntBASIC2.65□□□□□ -1.99
CSB-PGBD3P0DP91 AL596028.1-201ENST00000326971 197 ntBASIC2.64□□□□□ -1.99
CSB-PGBD3P0DP91 RNA5SP133-201ENST00000363368 119 ntBASIC2.63□□□□□ -1.99
CSB-PGBD3P0DP91 SNORD38.2-201ENST00000384470 69 ntBASIC2.63□□□□□ -1.99
CSB-PGBD3P0DP91 MIR653-201ENST00000385279 96 ntBASIC2.63□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-788P-201ENST00000390967 104 ntBASIC2.63□□□□□ -1.99
CSB-PGBD3P0DP91 SNORA17.3-201ENST00000391159 129 ntBASIC2.63□□□□□ -1.99
CSB-PGBD3P0DP91 RNA5SP445-201ENST00000515889 115 ntBASIC2.63□□□□□ -1.99
CSB-PGBD3P0DP91 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CSB-PGBD3P0DP91 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CSB-PGBD3P0DP91 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CSB-PGBD3P0DP91 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.62□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-480P-201ENST00000384332 107 ntBASIC2.62□□□□□ -1.99
CSB-PGBD3P0DP91 MIR520C-201ENST00000385005 87 ntBASIC2.62□□□□□ -1.99
CSB-PGBD3P0DP91 AC003989.2-201ENST00000440224 169 ntBASIC2.62□□□□□ -1.99
CSB-PGBD3P0DP91 AC090255.1-201ENST00000495779 349 ntBASIC2.62□□□□□ -1.99
CSB-PGBD3P0DP91 AC015688.6-201ENST00000577737 104 ntBASIC2.62□□□□□ -1.99
CSB-PGBD3P0DP91 AC103810.8-201ENST00000607347 118 ntBASIC2.62□□□□□ -1.99
CSB-PGBD3P0DP91 AC145423.2-201ENST00000610631 239 ntBASIC2.62□□□□□ -1.99
CSB-PGBD3P0DP91 AL627230.6-201ENST00000611129 280 ntBASIC2.62□□□□□ -1.99
CSB-PGBD3P0DP91 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CSB-PGBD3P0DP91 SNORD115-37-201ENST00000363768 82 ntBASIC2.61□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-519P-201ENST00000410590 108 ntBASIC2.61□□□□□ -1.99
CSB-PGBD3P0DP91 AL356379.1-201ENST00000414105 126 ntBASIC2.61□□□□□ -1.99
CSB-PGBD3P0DP91 AC141846.1-201ENST00000568348 142 ntBASIC2.61□□□□□ -1.99
CSB-PGBD3P0DP91 MIR4781-201ENST00000585250 76 ntBASIC2.61□□□□□ -1.99
CSB-PGBD3P0DP91 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CSB-PGBD3P0DP91 HSBP1P2-201ENST00000299671 229 ntBASIC2.6□□□□□ -1.99
CSB-PGBD3P0DP91 MIRLET7G-201ENST00000362280 84 ntBASIC2.6□□□□□ -1.99
CSB-PGBD3P0DP91 Y_RNA.168-201ENST00000363740 102 ntBASIC2.6□□□□□ -1.99
CSB-PGBD3P0DP91 RNU6-478P-201ENST00000363904 110 ntBASIC2.6□□□□□ -1.99
CSB-PGBD3P0DP91 RNA5SP233-201ENST00000459153 113 ntBASIC2.6□□□□□ -1.99
CSB-PGBD3P0DP91 RNU7-41P-201ENST00000515917 61 ntBASIC2.6□□□□□ -1.99
CSB-PGBD3P0DP91 MIR5089-201ENST00000580047 84 ntBASIC2.6□□□□□ -1.99
CSB-PGBD3P0DP91 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.6□□□□□ -1.99
CSB-PGBD3P0DP91 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CSB-PGBD3P0DP91 Y_RNA.226-201ENST00000364337 114 ntBASIC2.59□□□□□ -1.99
CSB-PGBD3P0DP91 RNU4-83P-201ENST00000410863 133 ntBASIC2.59□□□□□ -1.99
CSB-PGBD3P0DP91 SNORA25.13-201ENST00000516395 103 ntBASIC2.59□□□□□ -1.99
CSB-PGBD3P0DP91 MIR4251-201ENST00000635819 61 ntBASIC2.59□□□□□ -1.99
CSB-PGBD3P0DP91 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CSB-PGBD3P0DP91 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CSB-PGBD3P0DP91 RNA5SP190-201ENST00000365222 118 ntBASIC2.58□□□□□ -2
CSB-PGBD3P0DP91 SNORD38B-201ENST00000384690 67 ntBASIC2.58□□□□□ -2
CSB-PGBD3P0DP91 AC027119.1-201ENST00000440877 241 ntBASIC2.58□□□□□ -2
CSB-PGBD3P0DP91 AL450471.1-201ENST00000447509 127 ntBASIC2.58□□□□□ -2
CSB-PGBD3P0DP91 SNORD4B-201ENST00000459083 72 ntBASIC2.58□□□□□ -2
CSB-PGBD3P0DP91 SNORD13-201ENST00000459299 104 ntBASIC2.58□□□□□ -2
CSB-PGBD3P0DP91 RPS27P21-201ENST00000486977 252 ntBASIC2.58□□□□□ -2
CSB-PGBD3P0DP91 SNORA25.15-201ENST00000516487 89 ntBASIC2.58□□□□□ -2
CSB-PGBD3P0DP91 AC090897.1-201ENST00000580909 226 ntBASIC2.58□□□□□ -2
CSB-PGBD3P0DP91 MIR5694-201ENST00000581190 76 ntBASIC2.58□□□□□ -2
CSB-PGBD3P0DP91 SNORD38B-202ENST00000625943 69 ntBASIC2.58□□□□□ -2
CSB-PGBD3P0DP91 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.58□□□□□ -2
CSB-PGBD3P0DP91 MIR378A-201ENST00000362177 66 ntBASIC2.57□□□□□ -2
CSB-PGBD3P0DP91 RNU4-32P-201ENST00000363404 141 ntBASIC2.57□□□□□ -2
CSB-PGBD3P0DP91 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
CSB-PGBD3P0DP91 RNU6-922P-201ENST00000516753 99 ntBASIC2.57□□□□□ -2
CSB-PGBD3P0DP91 SNORA44.1-201ENST00000517031 108 ntBASIC2.57□□□□□ -2
CSB-PGBD3P0DP91 snoU13.31-201ENST00000607291 104 ntBASIC2.57□□□□□ -2
CSB-PGBD3P0DP91 AL662814.1-201ENST00000617364 121 ntBASIC2.57□□□□□ -2
CSB-PGBD3P0DP91 MIR8063-201ENST00000621930 81 ntBASIC2.57□□□□□ -2
CSB-PGBD3P0DP91 Y_RNA.788-201ENST00000622394 112 ntBASIC2.57□□□□□ -2
CSB-PGBD3P0DP91 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CSB-PGBD3P0DP91 RNU6-315P-201ENST00000362666 107 ntBASIC2.56□□□□□ -2
CSB-PGBD3P0DP91 Y_RNA.57-201ENST00000362806 113 ntBASIC2.56□□□□□ -2
CSB-PGBD3P0DP91 MIR30A-201ENST00000385092 71 ntBASIC2.56□□□□□ -2
CSB-PGBD3P0DP91 RNU6-129P-201ENST00000391022 107 ntBASIC2.56□□□□□ -2
CSB-PGBD3P0DP91 HMGN2P19-201ENST00000425149 265 ntBASIC2.56□□□□□ -2
CSB-PGBD3P0DP91 snoU13.9-201ENST00000458927 103 ntBASIC2.56□□□□□ -2
CSB-PGBD3P0DP91 RPS29P11-201ENST00000496507 171 ntBASIC2.56□□□□□ -2
CSB-PGBD3P0DP91 AC133485.1-201ENST00000567176 124 ntBASIC2.56□□□□□ -2
CSB-PGBD3P0DP91 MIR5002-201ENST00000584713 97 ntBASIC2.56□□□□□ -2
CSB-PGBD3P0DP91 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.56□□□□□ -2
CSB-PGBD3P0DP91 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSB-PGBD3P0DP91 MIR1236-201ENST00000408340 102 ntBASIC2.55□□□□□ -2
CSB-PGBD3P0DP91 RNA5SP237-201ENST00000410414 113 ntBASIC2.55□□□□□ -2
CSB-PGBD3P0DP91 AC244023.1-201ENST00000426884 112 ntBASIC2.55□□□□□ -2
CSB-PGBD3P0DP91 AC009474.2-201ENST00000451383 136 ntBASIC2.55□□□□□ -2
CSB-PGBD3P0DP91 RNU7-85P-201ENST00000458851 63 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 443.6 ms