Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CcsQ9WU84 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.47□□□□□ -0.41
CcsQ9WU84 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CcsQ9WU84 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.47□□□□□ -0.41
CcsQ9WU84 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.47□□□□□ -0.41
CcsQ9WU84 Mir6982-201ENSMUST00000184354 68 ntBASIC12.47□□□□□ -0.41
CcsQ9WU84 Gm37292-201ENSMUST00000192062 758 ntBASIC12.47□□□□□ -0.41
CcsQ9WU84 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CcsQ9WU84 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.47□□□□□ -0.41
CcsQ9WU84 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.47□□□□□ -0.41
CcsQ9WU84 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.47□□□□□ -0.41
CcsQ9WU84 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CcsQ9WU84 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.47□□□□□ -0.41
CcsQ9WU84 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CcsQ9WU84 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CcsQ9WU84 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CcsQ9WU84 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcsQ9WU84 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcsQ9WU84 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcsQ9WU84 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.46□□□□□ -0.41
CcsQ9WU84 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CcsQ9WU84 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcsQ9WU84 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.46□□□□□ -0.41
CcsQ9WU84 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcsQ9WU84 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CcsQ9WU84 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
CcsQ9WU84 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.46□□□□□ -0.41
CcsQ9WU84 Gm11643-201ENSMUST00000119578 864 ntBASIC12.46□□□□□ -0.41
CcsQ9WU84 Gm12382-201ENSMUST00000122005 922 ntBASIC12.46□□□□□ -0.41
CcsQ9WU84 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CcsQ9WU84 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CcsQ9WU84 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcsQ9WU84 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcsQ9WU84 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.46□□□□□ -0.41
CcsQ9WU84 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcsQ9WU84 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CcsQ9WU84 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CcsQ9WU84 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
CcsQ9WU84 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CcsQ9WU84 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CcsQ9WU84 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CcsQ9WU84 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CcsQ9WU84 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CcsQ9WU84 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CcsQ9WU84 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CcsQ9WU84 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
CcsQ9WU84 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CcsQ9WU84 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CcsQ9WU84 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CcsQ9WU84 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.46□□□□□ -0.42
CcsQ9WU84 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CcsQ9WU84 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CcsQ9WU84 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CcsQ9WU84 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CcsQ9WU84 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CcsQ9WU84 Mir5122-201ENSMUST00000175004 89 ntBASIC12.45□□□□□ -0.42
CcsQ9WU84 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CcsQ9WU84 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.45□□□□□ -0.42
CcsQ9WU84 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CcsQ9WU84 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.45□□□□□ -0.42
CcsQ9WU84 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CcsQ9WU84 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms