Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.44■□□□□ 0.06
Ube4bQ9ES00 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Ube4bQ9ES00 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Gm11643-201ENSMUST00000119578 864 ntBASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Gm12441-201ENSMUST00000121806 588 ntBASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4bQ9ES00 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Gm11249-201ENSMUST00000117071 859 ntBASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Gm15375-201ENSMUST00000119510 849 ntBASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4bQ9ES00 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4bQ9ES00 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.41■□□□□ 0.06
Ube4bQ9ES00 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms