Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr9Q9EQU3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Tlr9Q9EQU3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr9Q9EQU3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr9Q9EQU3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Tlr9Q9EQU3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr9Q9EQU3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr9Q9EQU3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Tlr9Q9EQU3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Tlr9Q9EQU3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Tlr9Q9EQU3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Gm25925-201ENSMUST00000158314 306 ntBASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Gm6623-201ENSMUST00000173570 544 ntBASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Tlr9Q9EQU3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr9Q9EQU3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr9Q9EQU3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Gm28033-201ENSMUST00000184224 96 ntBASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tlr9Q9EQU3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms