Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Gm15173-201ENSMUST00000122049 433 ntBASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Gm8655-201ENSMUST00000221159 852 ntBASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rsph3bQ9DA80 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rsph3bQ9DA80 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph3bQ9DA80 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph3bQ9DA80 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Gm12350-201ENSMUST00000121208 462 ntBASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Gm1401-201ENSMUST00000122048 772 ntBASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Gm7230-201ENSMUST00000173026 815 ntBASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Mir6404-201ENSMUST00000183699 94 ntBASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph3bQ9DA80 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms