Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
U2af1Q9D883 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
U2af1Q9D883 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
U2af1Q9D883 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
U2af1Q9D883 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC21■□□□□ 0.95
U2af1Q9D883 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC21■□□□□ 0.95
U2af1Q9D883 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC21■□□□□ 0.95
U2af1Q9D883 Gm20628-201ENSMUST00000177363 3215 ntBASIC21■□□□□ 0.95
U2af1Q9D883 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC21■□□□□ 0.95
U2af1Q9D883 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
U2af1Q9D883 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
U2af1Q9D883 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.99■□□□□ 0.95
U2af1Q9D883 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
U2af1Q9D883 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.99■□□□□ 0.95
U2af1Q9D883 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
U2af1Q9D883 Gm8097-201ENSMUST00000117903 829 ntBASIC20.99■□□□□ 0.95
U2af1Q9D883 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.99■□□□□ 0.95
U2af1Q9D883 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
U2af1Q9D883 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
U2af1Q9D883 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
U2af1Q9D883 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
U2af1Q9D883 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
U2af1Q9D883 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.98■□□□□ 0.95
U2af1Q9D883 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
U2af1Q9D883 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.98■□□□□ 0.95
U2af1Q9D883 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
U2af1Q9D883 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
U2af1Q9D883 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2af1Q9D883 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.97■□□□□ 0.95
U2af1Q9D883 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
U2af1Q9D883 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
U2af1Q9D883 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
U2af1Q9D883 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.97■□□□□ 0.95
U2af1Q9D883 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.97■□□□□ 0.95
U2af1Q9D883 Gm8655-201ENSMUST00000221159 852 ntBASIC20.97■□□□□ 0.95
U2af1Q9D883 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.97■□□□□ 0.95
U2af1Q9D883 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.97■□□□□ 0.95
U2af1Q9D883 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
U2af1Q9D883 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
U2af1Q9D883 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2af1Q9D883 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms