Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem54Q9D7S1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Tmem54Q9D7S1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem54Q9D7S1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem54Q9D7S1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem54Q9D7S1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tmem54Q9D7S1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem54Q9D7S1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem54Q9D7S1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem54Q9D7S1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem54Q9D7S1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Tmem54Q9D7S1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tmem54Q9D7S1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Gm25406-201ENSMUST00000157599 105 ntBASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tmem54Q9D7S1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Tmem54Q9D7S1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Gm7935-201ENSMUST00000100555 1278 ntBASIC14□□□□□ -0.17
Tmem54Q9D7S1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tmem54Q9D7S1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tmem54Q9D7S1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tmem54Q9D7S1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem54Q9D7S1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem54Q9D7S1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.98□□□□□ -0.17
Tmem54Q9D7S1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.98□□□□□ -0.17
Tmem54Q9D7S1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem54Q9D7S1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem54Q9D7S1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem54Q9D7S1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tmem54Q9D7S1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tmem54Q9D7S1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Tmem54Q9D7S1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.98□□□□□ -0.17
Tmem54Q9D7S1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms