Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.78■□□□□ 0.44
Tube1Q9D6T1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.78■□□□□ 0.44
Tube1Q9D6T1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tube1Q9D6T1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tube1Q9D6T1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tube1Q9D6T1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tube1Q9D6T1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tube1Q9D6T1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tube1Q9D6T1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tube1Q9D6T1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tube1Q9D6T1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tube1Q9D6T1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tube1Q9D6T1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tube1Q9D6T1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Gm12644-201ENSMUST00000119935 606 ntBASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tube1Q9D6T1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tube1Q9D6T1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tube1Q9D6T1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tube1Q9D6T1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tube1Q9D6T1 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.77■□□□□ 0.43
Tube1Q9D6T1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tube1Q9D6T1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Tube1Q9D6T1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tube1Q9D6T1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tube1Q9D6T1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 Gm11452-201ENSMUST00000122376 690 ntBASIC17.74■□□□□ 0.43
Tube1Q9D6T1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.74■□□□□ 0.43
Tube1Q9D6T1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tube1Q9D6T1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms