Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccdc7Q9D541 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.72■□□□□ 0.59
Ccdc7Q9D541 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc7Q9D541 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc7Q9D541 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc7Q9D541 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc7Q9D541 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc7Q9D541 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc7Q9D541 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc7Q9D541 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.72■□□□□ 0.59
Ccdc7Q9D541 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc7Q9D541 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc7Q9D541 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc7Q9D541 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc7Q9D541 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc7Q9D541 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.71■□□□□ 0.59
Ccdc7Q9D541 Gm9987-201ENSMUST00000069768 567 ntBASIC18.71■□□□□ 0.59
Ccdc7Q9D541 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc7Q9D541 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc7Q9D541 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc7Q9D541 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc7Q9D541 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc7Q9D541 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Ccdc7Q9D541 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Gm10231-201ENSMUST00000181584 441 ntBASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Gm10175-202ENSMUST00000208752 441 ntBASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc7Q9D541 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Gm6257-201ENSMUST00000163864 910 ntBASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Gm6345-202ENSMUST00000180900 204 ntBASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Gm5587-201ENSMUST00000206270 674 ntBASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc7Q9D541 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc7Q9D541 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc7Q9D541 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc7Q9D541 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc7Q9D541 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc7Q9D541 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ccdc7Q9D541 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc7Q9D541 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc7Q9D541 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc7Q9D541 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc7Q9D541 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc7Q9D541 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc7Q9D541 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms